Nicotiana tomentosiformis: 104088458
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Entry
104088458 CDS
T05025
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
104088458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nto03000
]
104088458
Transcription factors [BR:
nto03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104088458
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
104088458
NCBI-ProteinID:
XP_009591427
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All DBs
Position
3:88235752..88239102
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AA seq
349 aa
AA seq
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MEGESLSDRFFEDSEFDIFSILEALEGGGVSEFNMSNPTTTTTSDEINGLVSKEEEKKRK
LVSQKSTGSSATLQEYSETEADGGATPNSNKRQRVTAVIGGIEEGNNQIETRISHITVER
NRRRQMNEHLSVLRSLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEV
LSPRLAIPSPRVLPSPLSPRKPPLSPKINLPISPRTPQPTSPYKPNNNNNKRLQQPTISA
TPLEPSPTSSSTNSSIDSANELAANSKSAIADVEVKFSGSNVILKTMSPRIPGQAVKIIA
ALEELALEILHVSISTIDGTMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagagtttgtctgatcgtttctttgaggattctgaatttgacatctttagt
attttagaggctttagaaggaggcggtgtttcggagtttaacatgagtaaccccacaaca
acaacaacttcggatgaaattaatggtttagtttccaaagaagaagagaagaaaaggaag
ttggtttctcagaagtcaacaggttctagtgcaactttacaagaatactcagagactgaa
gcagacggtggtgctacaccaaatagcaataagagacaaagagtaacagcggtaattggt
gggatagaggagggaaataaccaaatagaaacaaggatttctcacataacagttgaaagg
aaccgcagaaggcaaatgaatgaacatttgtctgttctccgctctttgatgccttgtttt
tatgctaaacgaggcgatcaagcatcaataattggtggggtagtggattacataaacgag
ctgcagcaagttttacaatcattagaagccaagaaacagcgcaaagtttacagtgaagtt
ctaagtccaagactagcaattccaagtccaagagtattaccctcacctcttagtccaaga
aagccaccacttagccccaaaataaacttaccgattagcccaagaaccccacaaccaacc
agcccttataagcctaataataataataacaaaaggttacagcaaccaacaatatctgct
actccactagaaccatctcctacttcttcttccactaattcctccattgacagtgccaat
gaacttgctgctaattcaaaatcagcaatagctgatgtggaggtgaaattctccggctct
aatgttatactgaagacgatgtcgccgcgtattcctggccaagctgtgaagattattgct
gctttagaagaactcgcactggaaatactacatgttagcatcagtactattgatggaacc
atgctcaactctttcactattaagattggaattgaatgccaactaagtgctgaggaactg
gctcatcagattcagcagacattctgctaa
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