Nicotiana tomentosiformis: 104088696
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Entry
104088696 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104088696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104088696
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104088696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Mis12
Motif
Other DBs
NCBI-GeneID:
104088696
NCBI-ProteinID:
XP_009591714
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All DBs
Position
2:complement(116005880..116013474)
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AA seq
556 aa
AA seq
DB search
MAFSFTPQAQQPSPFQTPGQQQPSPFQIAGQQQSTPFQTPGQQQSSPFQTPGQQQSSPFQ
IPGQQQSSPFQTPGQQQSSPFSQITPFSQQPQQQQQLQFQQQQLQLQLQQQQQLQLQLQQ
QQQLQQQQQSQQQQQQLYLFTNDKTPATYSTKWADLHPDSQKLLLQIEERILEYRDESQR
LDQCSRLYDSSVANDGFELDASRSIQELGGVSISMERQKAILQELMVVVKDMLRNTEVAV
RSFMMLRPRFLRQSAPAAASSTAPSQASGATVAQTASTQAQSTPNAPVFDFYRGIPKKPS
PFLQQTVARFEKYLLECRQWVEELEQLMLLDSDRNSMNSSSSLLQSLPKVMSNVHDFFVH
VAAKVESIHQYIESMKMAYLADQRRRGDGSDPFLEADRRETAKLEAAARRVHPTLHLPAI
SQPSTQVAGLISSSAAPGASSAPQTSSAVPSALPGSGSSLFATPSVAASSSSLFTTPTMS
APVSSLFGTSGASPQNSLFGSLSTSSPASSAPLFGSTPASGVSGFATPFGSGAALGSGAS
FGTVSKSRAKSRTGRR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctttcactccacaggcacaacagccgtcgccattccaaactccaggccag
caacagccgtcgccattccaaattgccggccagcaacagtcgacgcctttccaaactccc
ggtcagcaacagtcgtcgccattccaaacacccggccagcaacagtcgtcgccattccaa
attcccggccagcaacagtcgtcgccattccaaactcctggccagcaacagtcgtcgcca
ttctcgcagatcactcccttttcgcagcagccgcaacaacaacagcaacttcaatttcaa
cagcagcagctacaactgcaattgcagcaacaacaacaactgcaactgcaattgcagcaa
caacaacaactgcagcagcaacagcagtcgcagcaacagcagcagcagttgtaccttttc
accaacgataagacgccagccacttacagtaccaaatgggcagacctccacccggattca
cagaagctgctgttgcaaattgaggagagaatactggaatacagggatgaaagtcaaagg
cttgaccaatgtagccgactttatgattcatcagtggccaatgatggctttgagttggat
gctagtcgcagcattcaggaacttggtggagttagtatatcaatggaaaggcaaaaagct
atcttgcaagagctaatggttgttgttaaagatatgctgcgcaatacagaggttgctgtg
cgttcctttatgatgttacgcccaaggtttcttcgtcaaagtgcacctgctgctgcaagt
tctactgctccatcacaggcatcaggtgcaacagtcgctcaaacagcatccactcaagca
cagtctactcccaatgcaccagtttttgatttttacagggggataccaaagaaaccctct
ccgtttttgcagcaaacagtcgcaagatttgagaaatatcttttagaatgccggcaatgg
gttgaagaattggagcagctgatgctcttagattctgacaggaattccatgaactccagt
tcatctttgttgcagtctcttccaaaagtcatgtcaaatgtgcatgacttttttgttcat
gttgcagcaaaggtagagagcattcatcagtacattgaatcaatgaaaatggcatacctg
gctgatcagcgccgtcgaggggatgggagcgatccttttcttgaggcggataggcgagaa
acagctaaactggaggcagctgctagaagggtacatccaactttgcatttacccgcaatt
tcacaaccatcaactcaagtagcaggattgatttccagctcagcagcacctggggcatcc
agtgcaccacaaacatcatctgcagttccttctgccttacctggaagtggatcctcactc
tttgctactccatctgttgctgcttcatcttcttccctgttcactactccaacaatgtca
gctccagtctcctctttgttcggaacatccggtgcttcccctcaaaattcactctttggg
tccttgtctacttccagtccagcctctagtgctccattatttggttctacccccgcttct
ggagtttcaggttttgcaacaccttttggttcaggtgctgcactaggatcaggggcaagc
tttgggactgtatctaagtctagagcaaaaagtcgtacaggcagacgctag
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