Nicotiana tomentosiformis: 104088813
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Entry
104088813 CDS
T05025
Name
(RefSeq) E3 SUMO-protein ligase MMS21 isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104088813
03400 DNA repair and recombination proteins [BR:
nto03400
]
104088813
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
104088813
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104088813
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-Nse
zf-ANAPC11
Homeobox_KN
zf-RING_UBOX
zf-MIZ
zf-C3HC4_2
zf-NOSIP
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
104088813
NCBI-ProteinID:
XP_009591846
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Position
7:complement(40117699..40124056)
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AA seq
374 aa
AA seq
DB search
MNSQNLQIYQSLPNHNKKRLNQEQIKLLESSFDSTKKLEPEKKLQLSRELGVPPRQISIW
YQNRRARWKNQNLEIDYNALQLKLETALSEKLQLEKETERLRGELQKANQMLIEINGERA
INIPLGDVSLSSYYEEGGSSSFHEDVISYNTTTWEIRKAVTMMKDIAVDLERDERTEMVK
DLEAGVIQLLGASDECMHLSEAIQSIGDELEPGPEPTNFKKKFDEEIAKSKARSLSSTQS
QPLLRQFREAIWHVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELVDPVRSM
DCKHIYEKKAILQFIKSKTSRGQCPVAGCPKVLQAQRVLCDPFLLIEIDEVRSMSKQNAG
PDAIEDFTTLDEED
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcaaaacttacaaatataccagtccttaccaaatcacaacaaaaagaggcta
aaccaagagcaaattaagcttttagagtcaagtttcgactcaactaagaagctcgagccg
gagaaaaaactccaactgtcaagagaattaggggttcctccgcgtcaaatttccatttgg
taccaaaacaggagagctagatggaagaatcagaatctggagattgactataatgccctt
cagctcaagcttgaaactgcattatctgagaagttacagttggaaaaagaaactgaacgt
cttcgaggggagttgcaaaaagcaaaccaaatgttaattgaaataaatggagaaagggca
ataaatattcctttaggtgatgtttcactatctagttattatgaggaaggagggagctct
agctttcacgaagatgtgatcagctataatactactacatgggaaattaggaaggctgtg
actatgatgaaggatatcgcggtggatttggagagagatgagagaaccgagatggtaaag
gatctcgaagctggcgttattcagttgttgggtgcgtctgatgagtgcatgcatctttcc
gaggcaattcagtctataggtgatgaattagagcctgggccagagccaacaaattttaag
aagaagtttgatgaagaaattgcaaaatcaaaggctagatcattgtctagcactcagagc
cagcctttgttgagacaattccgggaagccatctggcatgttcatcatgcaggacagcca
atgccaggtgaagagcaggaggacatagtaatgaccagtacgcagtgcaaccttctgaat
gtgacttgcccgctaagtggaaagcctgttactgaacttgtagatccagttcgtagcatg
gactgcaagcatatatatgagaagaaggctattctgcagtttattaagtccaaaacctca
cgtggccaatgccccgttgcaggttgtcctaaagttctccaggctcagagggtgttatgc
gaccctttcttacttatagaaattgatgaagtccgctccatgagtaagcaaaacgctgga
cctgatgcgatagaggattttactacacttgatgaagaggattga
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