Nicotiana tomentosiformis: 104088906
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Entry
104088906 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104088906
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104088906
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104088906
NCBI-ProteinID:
XP_009591965
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Position
5:131685371..131695491
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AA seq
679 aa
AA seq
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MKKREWSSILGLLGIFLQLFLLAESALTREKINKKNSQLDEQSFPPVQLLRLDDYVVVNN
GLFNITFSVPGGMVTGIQYNGIDNLLEDENEDDNRGYWDIVWNKPDKPGIFDKLHATEFN
VIMEDENQVELSFTRTWDSLNSSHLSMNIDKRFIILRGSFGFYSYGILERLEGWPNIDVY
QGRIVFKLKEELFQYMAISDERQRIMPTAQDREMGQILDYPEAVLLTNPTNSFIKGEVDD
KYQYSCENKDNRVHGWISPNPRTGFWMITPTDEFRTGGPLKQDLTSHTGPVNLNMFFSTH
YAGESLGLKFREGEPWKKVFGPVFTYLNSLSPDELDTLTLWTDAKEQMFIETENWPYNFP
LSEDFVRFDQRGIVTGRLLVRDSYVSEKLITANSAFIGLAAPGDIGSWQMENKAYQFWTQ
TDTEGYFLIKNVIPGNYSLYAWIPGFIGDYMYDAYINVTPGSRTRVETLVYNAPRNGPTL
WEIGIPERTASEFFIPDAQPRLLNQLYVVNNAERFRQYGLWDRYTEIYPDDDLVFTVGLS
SYQTDWFFAHVNRYIYNDDGNKTYVPTTWQVLFDLDDIDQSANYTLQLALASANDAELQV
QFNDPDTDAPHYTTGLIGKDNAIARHGIHGLYRLYTINVPGSLLVFGTNVMYLKQTRSER
PWRGIMYDYIRLEGPPESN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagagaatggagctctattcttggattgctgggaatctttcttcagctattt
ttgttggctgaatctgcattaacaagagaaaaaataaataagaaaaacagccaattagac
gagcagtcttttccaccagtacaattgcttagactggatgattatgtggtggttaataat
ggactgtttaacattactttctctgttcctgggggaatggtcactggaatacaatacaat
gggattgataatttattggaagatgaaaatgaagatgataacagagggtattgggatatt
gtttggaacaagccagacaaaccagggatttttgacaaattacatgcaacagagtttaat
gttattatggaagatgaaaatcaagtggagctttcatttacaaggacttgggattcttta
aattcctcacatctttccatgaatattgataaaaggtttataatactaagaggaagtttt
ggattttactcttatggtattttggaacgtttagaaggatggccaaatattgatgtctac
caaggaagaattgtcttcaagctcaaagaagaattattccaatatatggcaatttcagat
gaacggcaaaggattatgccaacggcccaagatcgtgaaatgggccaaatacttgattat
ccagaagctgttcttcttacaaacccaactaattctttcatcaaaggagaggttgatgac
aaatatcaatattcttgtgagaacaaagataatcgggtccatgggtggataagcccaaat
ccacgaaccggattttggatgataacaccaaccgatgagttcagaactggtgggcctctt
aaacaagaccttacttctcataccggcccagtaaacctcaatatgttttttagtacacat
tatgctggagagagtttgggactgaaatttagagaaggagagccctggaaaaaggtgttt
ggccctgtttttacatacctaaactctctttcacctgatgagctagacactcttacacta
tggacagatgcaaaagaacaaatgttcatagaaactgaaaattggccatataatttccct
ctttcggaggattttgttcgatttgatcaacggggtattgtaactggcagattactcgtt
cgcgacagctatgtaagtgaaaagcttataactgcaaactctgctttcattggattagct
gctccaggagatattggatcatggcaaatggaaaacaaggcttaccagttttggactcaa
acagataccgagggctatttcttgattaagaatgtcatccctggaaattatagcttgtat
gcttggatccctggatttattggagattacatgtacgacgcatacatcaatgtcacccca
ggatcaagaacaagagtagaaacacttgtatacaatgcgccaaggaatggtccaacatta
tgggaaataggaattccagaaaggactgcttctgaattcttcattcctgatgcacaacca
agactcttgaaccaattatatgtcgtaaataatgcagaaaggttcaggcaatatggatta
tgggatcggtacactgaaatataccctgatgatgatttggtttttactgttggattaagc
agctatcaaacagattggttctttgctcatgtcaatagatatatttacaatgatgatgga
aacaagacttatgtaccaactacatggcaagttttatttgatcttgatgatattgatcaa
tcagcaaattatactcttcaactagcattagcctcagcaaatgatgctgaacttcaagtt
caatttaatgatccagacacagatgctcctcactatacaacaggattgataggcaaagat
aacgcgatagctagacatgggattcatggattatacagactatatactataaatgttcct
ggttctcttcttgtgtttggaaccaatgttatgtatctgaaacaaactagaagtgaaagg
ccttggagaggaattatgtacgattatattcgacttgaaggccctcctgaaagtaattaa
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