Nicotiana tomentosiformis: 104088907
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Entry
104088907 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104088907
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104088907
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
104088907
NCBI-ProteinID:
XP_009591967
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Position
5:131662679..131667149
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AA seq
615 aa
AA seq
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MSNGIANVTLSIPDGLITNISYSGINNLLATQNVENDRGYWDVFWNQTASRRVRKKFLGT
SFEVIMDSEKQAEISFKNTWNASQSDELPLNFDIRFVMLQDTPGFYTYAIFERLEGWPLV
YIENLRIVFKLQQDMFHYMAISDERQRVMPMPVDRETGKVLDYKEAVLLTNPTNPDLKGE
VDDKYFYANDNKDDRVHGWVGANPPVGFWMIIPSDEFRIGGPYKQDLTSHVGPTVLSVFV
SRHYAGEDLVIKFQQGEPWKKVIGPVFLYLNSDTSAKDNPAVLWDDAKKRMNQEVASWPY
DFPVTKDYIKSNQRGNIRGQLFVNDSTTTLVPASNAYIGLASPGDVGSWQRENKGYQFWT
KTDASGNFTIENVISGTYNLYATILGIIGDYKYTSDVQVTPGSSIELGSLVYNPPRNGVT
LWEIGVPDRTAAEFFVPTPPPQFKVHIYQNNSESIFRQYGLWEQYSALYPENDLVYNVAT
SNYSSDWFFAHVTRNIGNNTYNAATWRIIFSLESVDNTSNYTLQLALAAAQRAELQVRFN
DGKLATPHFTTGVIGGDNAIARHGIHGLYWLYSIEVQGNLLLNGTNTIFLTQAIATNPFQ
GVMYDYLRFEAPHQL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggcatcgccaatgttactttatcaataccagatggtctcatcacgaacata
tcatatagtggaatcaacaacttacttgcaacacaaaatgtcgaaaatgatagagggtat
tgggatgttttctggaatcagacagcatctcgaagagttcgaaaaaagtttttggggaca
agttttgaggtcataatggacagtgaaaagcaggcagaaatttcatttaaaaatacatgg
aatgcttctcaatctgatgaacttccattaaattttgacataaggtttgtgatgctacaa
gatacacccggattttatacttacgctatatttgaacgtctagaaggatggccccttgtc
tacattgaaaatctaaggattgtcttcaagcttcaacaagacatgtttcattacatggct
atctcggatgagagacagcgggtcatgccaatgccggtggatcgagaaactggcaaggtg
cttgactacaaagaagctgttcttttgacaaatccaactaatccagatctaaaaggagag
gtggatgacaaatacttctatgcaaatgataacaaagatgatagagttcatgggtgggta
ggtgctaatcctcctgtagggttttggatgataattccgagtgatgagtttcgcatcgga
ggaccttacaaacaagatctcacttcacatgttggtccaactgtactttctgtatttgta
agtagacattatgccggagaagatctggtaatcaaatttcaacaaggagagccttggaaa
aaagttattggccctgtatttctgtatcttaactcagatacttcagctaaggacaatccc
gccgtactttgggatgatgcaaagaaaaggatgaatcaagaagtcgcaagctggccttat
gattttccagttacaaaagactacatcaaatctaatcaacgaggaaatattagaggccaa
ctttttgttaacgacagcactactactttagtaccagcatccaacgcttatatagggtta
gcatcaccaggagatgttggatcttggcaaagagaaaacaaaggatatcagttttggact
aaaacagacgctagtgggaattttaccatagagaatgtaatatccggtacatataacttg
tatgcaaccatccttggaattattggggattacaaatacacttctgatgtacaagtgact
ccaggttctagtattgaattggggagtttggtttataatcctccacgaaatggagtcaca
ctttgggaaatcggtgtgccagatcgaacagctgctgaattctttgttccaactccaccc
ccacaatttaaagttcacatataccaaaacaattctgaatcaatatttagacaatatggt
ttgtgggaacaatatagtgctttatatcctgaaaatgatctcgtctacaatgttgcgact
agcaactattcaagcgactggttttttgctcatgttaccaggaatataggaaacaacacg
tataatgctgccacatggagaattatatttagccttgaaagtgttgacaatacgtcgaat
tacactctccaattggctcttgctgcagctcagagagctgaactacaagttcgtttcaac
gatggaaaattagcaacacctcactttacaacaggggtaatagggggagataatgcaatt
gcaagacatggtattcatggtttatattggctttacagcattgaagtacagggcaatcta
cttctaaatggaacaaacacgatatttcttacacaagcaatagctacaaacccctttcaa
ggagtaatgtatgattatcttcgttttgaagcacctcatcagttataa
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