Nicotiana tomentosiformis: 104088910
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Entry
104088910 CDS
T05025
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104088910
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
104088910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
104088910
NCBI-ProteinID:
XP_009591969
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All DBs
Position
4:complement(111532141..111537553)
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AA seq
674 aa
AA seq
DB search
MSMKLTPSKRPHVWSLAESNGRGKWQKSASISSQKSPPKVRILCPASKIDSFIGEDSSII
SRIQEETGAEVRVEDSVVGCDERVIVIVGSGKEDEVGTEQLQADVEVTETKEKDSCTDEN
GDKRENKVSPPAESSKTEKETVSIQKALFLVFDRMIEGRVGMDGGDEEGDNSSSLIIRLL
ILSSQVGCLLGKAGSVIKQMSSESGAQIQVLPKDKRPSCASSSEELVQISGEREAVKKAL
EVVARQLLENSSWDQDFLSADAGGPSSQSPGHPLSNQELHPPSARPYRGQGPPSSVGSRD
GEVGIPGRMNPIPDALTFRLLCPDEKVGGIIGKGGSIIKALQHETGCQIKVLEGAGDSED
RVIVISGPAHPDDRISLPQDAVLRIQSRICRAAPENKDNGMVAKLLVFSNQIGCLLGKGG
GIIAEMRKSTGAYIRIVGKDQTPKFASENEEVVQVNGDFEKVCEALLQITTRLQNHYFRD
AFPSNPGFLDQITPFPSHMGRREFSPPGMFSNIRPSFHKFDAVGVLPPHGGFHPHDDRPP
FMQNFRRPGIPPHISDRMPSSAPWGSQGLGEGGGFPDYAGGPRSIGGFGGGSHPAVITST
TVEVVVPRSVVPAIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQ
SLIQAFVMVETEAA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaagttgacaccttccaagcggccgcatgtttggagccttgcagaatcaaat
ggccgagggaagtggcagaaatcagcatctattagttcccagaaatcacctccgaaagtt
cgtatactatgccctgcttctaagatagattcctttatcggagaggatagtagcatcatt
tctcggatacaagaggaaactggtgcagaggttcgagttgaggatagtgttgttggttgt
gatgagagggtgatagttattgtaggttcaggaaaagaagatgaagtgggaaccgaacag
ctccaggctgatgttgaggtaactgaaactaaagaaaaggacagttgcactgatgaaaat
ggtgataagcgtgagaataaggtgtcccctccagcagaaagctccaaaactgagaaggag
acggtatctattcagaaagctctattcttggtatttgataggatgattgaaggaagagta
ggaatggatggaggagatgaagagggtgacaattcttcctcattaattataagattgctt
atactctccagtcaagtgggatgtttgttaggaaaagctggtagtgtgataaagcagatg
tcttctgaaagtggggcacagatacaggttcttcccaaggacaaacgaccttcttgtgcg
tcttcatctgaagaattggttcagatttctggggagcgtgaggcagttaaaaaagctctt
gaagtcgttgctcggcaattacttgagaattcctcttgggatcaggattttctctctgct
gatgctggtggtccatcttctcagtctcctggccatcctctgtctaaccaggaattgcat
ccaccatcagcacgtccttaccgtgggcaggggccaccgtcctctgttggatctcgtgat
ggggaagttggtatacctggccgaatgaaccctattcctgatgccttgactttcagatta
ctttgtccggatgaaaaagttggaggtataattggaaagggaggaagtataatcaaagca
cttcagcatgagactgggtgtcagatcaaagttctggaaggtgcaggggattctgaagat
cgagttattgtcatctctggtccagcgcacccagatgataggatatctttgccgcaagat
gctgtccttcgcattcaatcccgaatttgtcgggctgcacctgagaacaaggacaatggc
atggttgcaaaacttttggtgttctcaaatcaaattggatgcctcttgggtaaaggtggc
ggtataatagctgaaatgaggaagtcaactggagcctatattcgtatcgtaggcaaggat
caaaccccaaagtttgcgtcagaaaatgaagaagtagttcaggtaaatggagactttgaa
aaagtttgtgaagcccttctgcagattaccaccagattgcagaatcattactttcgtgat
gcatttccttcaaaccctggtttcctggaccaaataactccattcccttcacacatggga
agaagagagttttcacctccaggcatgttctctaacattcgtccatcatttcacaagttt
gatgctgttggtgtcctacctccacatggtggtttccatccacatgatgatcgtcctccc
tttatgcaaaatttccgtaggccaggcattccacctcatatatctgatagaatgccatct
tcagcaccatggggttctcagggactgggtgaaggtgggggcttcccagactatgcggga
ggtcctcgaagtattggcggatttggaggaggaagtcatccagctgtgatcacaagcact
actgtcgaagtagttgtacctcgatctgtcgttcctgcaatctatggagaaggtggggga
tgtcttcgacaaatatgtgagatttctgatgcaaaagtcaccataaatgatcccaagcct
ggagcaacagagactgttatcattatatctgggacgcctgagcagactaatgctgctcaa
agtctcatccaagcctttgtaatggtcgagactgaagctgcttga
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