Nicotiana tomentosiformis: 104089178
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Entry
104089178 CDS
T05025
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104089178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104089178
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
104089178
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
104089178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_TPR
FAN1_HTH
Sgf11
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
104089178
NCBI-ProteinID:
XP_009592313
LinkDB
All DBs
Position
9:complement(1064503..1084356)
Genome browser
AA seq
987 aa
AA seq
DB search
MLKGRESLIRLVGRRRRFLSRRHSLLTSSPPQHQIGCKEYKDDPSIGNGNVDEEEWVDCP
VCGKKIRGEDRVINSHLDKCLTRGSKRKLSQCTLFQLNFCTIPRVTVSSIESDVTRTDIG
PSTGDGNICDLASVTFSKNIRDLASEMNSSDGPENNIQDESESSVCNRVNQMENLDGLIK
LDDECKLLSDAKPMQIFRLEGSPQHQISDDRIDNIADSPLSLSEKRMPKCVESSEDDDNS
EILLDTFIVGRRFGNGGELTVGAMIMLSRDPDNVKDQNAIKVLTKDTDHNKELGYIPREL
AQYLSPLIDKFHLRFEGRITSIPQHPHAVVPIQIYSSGIVSFGEKDSSRLQVFNSLRRNA
LSAAEFSKTHSPIPAKYQHNLLLLLKEVLNINGHLFTEGEKTLLEAFLSLSDDSQRLFAR
LYARKGPWFRMASISYAEICDCEEAVKGLSEAECVTLFESMDKPQINDLKEVLNVLNVGE
LRDLISSLNKTHKKIAQNSDRGTRKQDYIARVLAAYQGGLCPNLTSMILGKTGRCIRISA
SAESVFWRAERLFFLNGEQDLSEFLLVDLGIVKYPAYNCIFTDQIFPDRSDLLSYEEAIE
VAQIMDESLDENNNEFVSRCVEISTSNVSSFVEEDRSAHSGSMAAFLSRFSASWVYSKVI
LLGVSFLEHEQRFKEAINLLKLLLDKFKCDRRRGYWNLRLSVDLEHVGCLDESLEVAEKG
LLDPWVRAGSRVALQRRVLRLGKPPRRWRTPSFSSSVKRKIVEVHVQGRPLNCKTGVKNV
FYGEDGDRCGVEELALQYYAGEGGSWQGVHTESGIWLTIFGLLMWDVVFADVPNVFRTKF
QTAPLDLETDSFYEVRRGLVEALLDKIEHGMAEELLIMSWESHVGTACRGVNWDKHSLSE
LRAAVTCIGGPCLASICRNLAQDYRSWSSGMPDLLLWRFRDDYRGEAKLVEVKGPRDRLS
EQQRAWLLFLIDCGFNVEVCKVSHAPV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagggcgggaaagtttaatccgattggttggtcgccgacggcgatttctcagt
cgccgtcactctcttctcacctcatctcctcctcagcatcaaattggctgtaaggaatat
aaggatgacccaagcattggaaatggaaatgttgatgaagaagaatgggttgattgtcct
gtttgtgggaagaagatacgaggcgaagatcgtgtgattaactctcatttagataaatgc
cttactagaggaagtaaacgcaaattgagccagtgcacccttttccagttgaacttttgc
acaatacctagagttacagtctcatccatcgagtcggacgttacaaggactgacattggt
ccaagtactggtgatggtaatatctgtgaccttgcttctgttaccttctcaaaaaatata
cgtgacctggcttctgaaatgaacagctcagatggtcccgaaaataatatccaagatgaa
tccgagagtagtgtttgtaatagggttaatcaaatggaaaacttagatggtctcatcaaa
ctggatgatgaatgcaaacttctgtccgatgcaaagccaatgcaaatttttaggctagag
ggttctcctcaacaccaaataagtgatgatagaattgacaacatcgcagactcaccttta
tcactttctgaaaaaaggatgccgaaatgtgtggaatcttcggaagatgatgataactct
gagattttgcttgatacattcattgttggccgtaggtttggtaatggcggagagttaact
gttggagcaatgataatgctttcaagagatcccgataatgtcaaggaccagaatgcaatc
aaggttctaactaaagatactgatcacaataaagagctaggttacatccccagggaattg
gcacagtatttatctccattgatagacaagttccacctgaggtttgagggccgtataact
tccattccgcagcatcctcatgcagttgtgccaattcagatatattcctctggcatcgtg
tcttttggcgaaaaggactcctctagactccaagtattcaattccttacggagaaatgct
ctatcggctgctgaattttccaagactcactctcctatccctgcaaaataccagcataac
cttctacttttactaaaagaggttttgaatatcaacggacatctttttactgaaggcgag
aaaacattattggaagcttttttatcactctcagatgacagtcaaaggctctttgctcgg
ctttatgcacgtaaaggcccatggtttcggatggctagcatatcatatgccgaaatatgt
gattgtgaagaagctgttaaggggctttctgaagcagaatgtgttactttattcgaatca
atggataaaccacaaattaatgacttaaaggaggttttgaatgttcttaatgttggtgaa
ctacgggaccttatctctagtcttaacaagacacataagaagattgcccagaactctgat
cgtggtactagaaagcaagattacattgctcgggttcttgctgcatatcaaggtggttta
tgccccaaccttacaagcatgattctagggaaaactggaagatgcatccggatatctgca
tcagctgaatctgtcttttggcgtgccgagaggctatttttcctgaatggagagcaggac
ctgtcagaatttttacttgttgacttgggcattgtgaaatatcctgcttacaactgcata
ttcacagaccaaatttttccagacagaagtgacctattgtcttatgaagaggccattgag
gttgcacaaattatggatgagtctcttgatgagaacaacaatgagttcgtatcaagatgc
gtagagatctctacctctaacgtatctagctttgtggaggaagatagatcagctcattct
gggtcgatggctgcatttttatctcgcttttcagccagttgggtatattctaaggtgatc
ctgctgggtgtttctttcctggagcatgaacagaggtttaaagaagcaatcaatttgctt
aagctgctgctagataaatttaaatgtgatcgaagaaggggatattggaatctaaggctc
tcagttgatttggagcatgttgggtgcctggatgagagtcttgaagtagctgaaaagggg
ttgctagatccttgggttcgtgctggctctagagtggctctgcaaaggcgtgttctgcgg
ttggggaagccccctagacgttggagaactcccagtttttcgagttctgtcaaaaggaag
atagttgaggttcatgttcagggcagaccattgaactgcaaaacgggggtgaagaatgtc
ttttatggtgaggatggagaccgctgtggagtagaagagcttgctctacagtattatgct
ggagaaggaggaagctggcagggtgttcacactgagagtgggatttggttgactattttc
gggcttctaatgtgggatgttgtatttgctgatgtgccaaatgtcttccgcaccaaattt
cagactgcacctttggatctggaaactgatagcttttatgaagtcagaaggggtcttgta
gaagctcttctagataagattgagcatggcatggcggaagagttacttatcatgtcatgg
gaatcacatgtgggaacagcctgtaggggagtcaactgggacaagcattccctgtctgag
ctgcgagcagctgttacatgcattggtggtccttgtcttgcgtcaatctgtagaaatttg
gctcaagattacaggagctggtctagtggaatgcctgacttgttgctgtggcgcttccgt
gacgactacagaggtgaagcaaagcttgttgaagtgaaaggccccagagacagactttct
gaacaacaacgtgcatggttactctttttaattgactgtggcttcaatgttgaggtatgc
aaagtgagtcatgccccagtatag
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