Nicotiana tomentosiformis: 104089402
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Entry
104089402 CDS
T05025
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104089402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104089402
03036 Chromosome and associated proteins [BR:
nto03036
]
104089402
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104089402
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104089402
RSF complex
104089402
WICH complex
104089402
B-WICH complex
104089402
NORC complex
104089402
BRF complex
104089402
NuRF complex (fruit fly)
104089402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
Myb_DNA-binding
DEAD
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
104089402
NCBI-ProteinID:
XP_070033759
LinkDB
All DBs
Position
6:105638302..105653155
Genome browser
AA seq
1047 aa
AA seq
DB search
MGKHSRSKSSSSEPPSDSSEEEQVQDQVNEEEDEEELEAVARTAEDSDEEDNDAATDVAD
QDDGDNEEEVAANEISKREKARLKEMERIKKKKIQEMLDSQNAAIDADMDNKGKGRLKYL
LQQTELFAHFAKSEQSTSQKKTKGRGRHASKVTEEEEDEEYLKDEEDGLSGNTRLVAQPS
CIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLREFRGITGPHMV
VAPKSTLGNWMNEIKRFCPVLRAVKFLGDPDERRYIREELLVAGKFDVCVTSFEMVIKEK
SALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNFL
LPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKV
GMSQMQKQYYKALLQKDLEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGE
HLVENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYKGHQYCRIDGNTGGE
DRDASIEAFNKPGSEKFAFLLSTRAGGLGINLATADVVILYDSDWNPQADLQAQDRAHRI
GQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGA
EMVFSSKDSTITDEDIDRIIAKGEEAKAELDAKMKKFTEDAIKFKMDDTADLYDFGEEED
KNKVDFKKIISDNWVEPSKRERKRNYSESEYFKQTMRQSAPARPKEPRIPRMPQLHDFQF
FNTQRLSELYEKEVRYLMQTHQKNQVKDTIEVEEPEDAGEPLTAVEQEEKERLLEEGFST
WSRRDFNTFIRSCEKYGRNDLKSIAAEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNI
ERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGY
GNWDELKAAFRSSPLFRFDWFVKSRTTQELARRCDALIRLIERENQEFDERERQARKEKK
LAKNMTPSKRTLARQAAESPPPSKKRK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacactcgagatccaaatcctcgtcgtcggagcctccatcggatagttcggag
gaggaacaagtccaggatcaggtcaatgaggaagaagacgaagaggagctcgaggccgtc
gcgaggactgctgaggactccgacgaggaggacaatgacgccgccaccgacgtggcagac
caagacgatggggataatgaggaagaggttgcagccaatgaaatatccaagcgcgaaaag
gccaggttgaaagagatggagaggatcaagaagaagaaaatacaagaaatgttggattca
cagaatgctgccattgatgctgacatggacaacaagggaaaggggcgactgaagtatctc
ttgcagcaaactgagctatttgcacattttgccaaaagcgagcagtccacctctcaaaag
aagacaaagggaaggggtcgtcatgcatcaaaagtaactgaagaggaagaagatgaagag
tatctcaaagatgaagaagacggactttctgggaatacacgattggtggcacaaccctcc
tgtattcaagggaagatgagggattatcaacttgctggtttgaactggctgatacgactg
tatgagaatggaataaatggaatacttgctgatgaaatgggtcttggtaagacattgcaa
accatctccttgctgggctatctacgtgaatttagaggaataactggtcctcatatggtt
gttgctccaaaatcgactcttggcaattggatgaatgaaatcaaacgtttctgtcctgtt
ttacgtgctgttaagttccttggagatcctgatgaaaggagatatatacgtgaggagtta
cttgttgcggggaagtttgacgtgtgtgtcacaagctttgagatggttatcaaagagaag
tctgctttacggcgctttagttggcgttacatcataattgatgaggcacataggatcaag
aatgaaaattctcttctttcaaaaacaatgaggctctacaacactaattatagactactt
atcacggggacaccacttcagaataatcttcacgaactctgggcgcttctgaactttctg
ctgcctgagatctttagctcagctgagacttttgatgagtggttccagatttctggtgaa
aatgaccagcaggaggtggtccaacagcttcataaggtcctccgtccattccttcttagg
aggctgaagtctgatgtggagaaaggcctgcctcccaaaaaagaaacaattcttaaggtt
ggtatgtcccagatgcagaagcagtactacaaggctctgctgcagaaagatcttgaggtt
gtcaattctggaggagagcgcaagcgtcttctcaatatagcaatgcagctacgtaaatgc
tgtaatcatccatatcttttccaaggtgctgagccaggacctccatatacaacaggagag
catctcgtagaaaatgctgggaaaatggttcttctagataagttgcttcctaaattgaag
gaacgtggctcaagggtcttaatattttcacagatgacaaggctattggacatccttgaa
gactacttgatgtacaaaggtcaccaatattgtcggattgatggaaatactggtggtgag
gatcgtgatgcttctattgaggcttttaacaaaccagggagtgaaaaatttgcattctta
ttgtcaaccagagctggtggtcttggtatcaatcttgctacagcagatgttgttattctt
tatgatagtgattggaatccacaggctgatttgcaggctcaggaccgagcccataggatt
ggtcagaagaaggaagtccaagtattccgcttctgcactgagtataccattgaggaaaag
gtgattgaaagggcttacaagaagctagcacttgatgcattggttatccagcaggggcgg
ctagctgagcagaaagctgttaataaggatgagctgctgcaaatggtgcgatttggtgct
gaaatggttttcagttccaaagatagcaccattactgatgaggatatagatagaataatt
gctaaaggagaagaggcaaaagctgaacttgatgccaagatgaagaagtttacagaagat
gctatcaagtttaagatggatgacactgctgatttgtatgactttggtgaagaggaggat
aaaaacaaggtggatttcaagaaaattatcagcgataattgggttgaaccttcaaaaaga
gaaagaaagcgcaactactcagagtctgaatacttcaagcagaccatgcgtcagagcgcc
cctgcaagacctaaagagcctcggatccctcggatgcctcagctgcacgattttcagttc
ttcaatacacagagactgagtgagttgtatgagaaggaagtgcgctatcttatgcaaaca
caccagaagaatcaggttaaagacactatagaggtggaagaacctgaagatgcaggagag
cctttaacggctgtagagcaggaggagaaggagcgactattggaagagggattttcaaca
tggagtagaagagacttcaatacctttatcaggtcttgtgagaagtatggtcgcaatgac
ttaaaaagtattgctgctgaaatggaagggaaaactgaggaggaggttgaaagatacgcg
aaagttttcaaagaaagatacaaagaactaaatgattatgacaggattattaagaacatt
gaaagaggagaggctagaatttcacggagagatgagattatgaaagcaattggtaagaag
ttggatcgatacaaaaatccatggttggaattgaagatccagtatggtcagaacaaaggg
aagctgtataacgaggagtgtgatcgtttcatgatatgtatggttcacaagctcggctat
ggaaattgggatgagctgaaggctgcatttcgctcatcacccttgttccggtttgattgg
tttgtgaagtctcgtaccactcaagaacttgccagaagatgcgatgcacttattcggttg
attgagagggaaaatcaagaatttgatgagagggagaggcaggcacgcaaagaaaagaag
cttgcgaagaacatgactccatcaaagcgcaccttggcaagacaggcagctgaaagccct
cctccttcgaagaagcggaagtaa
DBGET
integrated database retrieval system
