Nicotiana tomentosiformis: 104089628
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Entry
104089628 CDS
T05025
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104089628
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104089628
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
UnbV_ASPIC
Motif
Other DBs
NCBI-GeneID:
104089628
NCBI-ProteinID:
XP_009592870
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Position
6:49476387..49479687
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AA seq
392 aa
AA seq
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MANFKTMTCTGVSLLLFLCLIPSCLAYNVVSFGARGDGRTDSTSAFLRAWSAACHSTSQA
NVYIPRGTYLVRTLNLNGPCRRRIEFRIDGTLIAPANYHAIGHSEFWIMFYKVSGLSVYG
GTMNAKGHGYWSCRKGGKSCPQGARSIQFMWCNNVVLRGLTSLHSQRVHVGIGYSSNVRI
ENVKIIAPSGSPNTDGIHVQNSRGVTIYGSIIQTGDDCISVGPGSMNLWIEKIGCGPGHG
ISIGSLGSSYNEAGVANITVTNSVFTKTQNGVRVKSWARPSGGYAKNLMFSNLIMKNVGY
PIIIDQNYCPDNSCPHQNSGVKVSQVTYKNVKGTSSTQAAMKFDCSYTNPCTGIRLQDIK
LTHNDRLRRPAISYCRNASGRRGGTVTPRSCF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttcaaaactatgacatgtaccggtgtttctttgttgctcttcttgtgttta
ataccttcttgtttagcctacaatgtggttagttttggggctaggggagatgggaggaca
gactcaacctccgcatttcttcgcgcttggtctgctgcctgccactctactagccaggcc
aacgtgtacattccacggggaacctatttggtaagaacgttgaatttaaacggcccttgt
cggagaagaattgagttccgaattgacggtactctcattgctccggccaattatcacgca
attggtcattctgagttctggattatgttttataaggtaagtgggctttcagtgtatgga
ggaactatgaacgccaagggtcatggttattggtcgtgccgaaagggtggaaagtcttgc
ccacaaggagctaggtcaatacaatttatgtggtgtaacaatgtagtgttgaggggctta
acatcactccacagtcaaagagtacatgtggggataggttacagcagcaatgtgagaatt
gagaatgtgaagataatagccccaagtggaagcccaaatactgatggcattcatgtacaa
aactcaagaggggttaccatttacggcagcatcatccagactggagatgactgcatttcc
gttggccctggctccatgaacttgtggattgaaaaaattggatgtggacctggacatggc
atcagcataggaagtttggggagtagttacaacgaagctggagttgcgaatataacagta
acaaattcggttttcacgaagacacagaatggcgttagagtaaagtcctgggcaagacca
agtggtggctatgctaaaaatctcatgttctcaaatcttattatgaagaatgttgggtac
cccataatcattgaccaaaactattgtcccgataatagttgccctcatcagaattcagga
gtaaaggtgagtcaagtaacatacaagaatgtgaaagggacatcatccacacaggcagcc
atgaaatttgattgcagctacacaaatccatgcactggaatcagactgcaagacataaag
cttactcacaatgatcgcttaagaaggcctgcaatatcctactgtagaaatgcaagtgga
agacgtggtggcacagtcactcccaggagttgcttctaa
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