Nicotiana tomentosiformis: 104089821
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Entry
104089821 CDS
T05025
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104089821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104089821
03110 Chaperones and folding catalysts [BR:
nto03110
]
104089821
03029 Mitochondrial biogenesis [BR:
nto03029
]
104089821
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104089821
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104089821
Messenger RNA biogenesis [BR:
nto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104089821
Chaperones and folding catalysts [BR:
nto03110
]
Heat shock proteins
HSP60 / Chaperonin
104089821
Mitochondrial biogenesis [BR:
nto03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104089821
Exosome [BR:
nto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104089821
Exosomal proteins of other body fluids (saliva and urine)
104089821
Exosomal proteins of breast cancer cells
104089821
Exosomal proteins of colorectal cancer cells
104089821
Exosomal proteins of bladder cancer cells
104089821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104089821
NCBI-ProteinID:
XP_009593108
LinkDB
All DBs
Position
2:complement(54207811..54212878)
Genome browser
AA seq
583 aa
AA seq
DB search
MSLSIISPLYFPLKLSFSEEKGMCNSWALGQSLGKKKMMVARAGPKRIAFDKECREALLS
GINKIADAVSVTLGPKGRNVVLSESGVLKVINDGVTIAQAIELPDSIENAGVTLIKEVAT
KTNSLAGDGTTTAIVLAREMVKAGLLAVAFGANPVSMKKGMEQTVRELVKILKKKSYPVR
GNDDIKAVASISAGNDEFIGSLIAEAIKKIGPDGVICIESSSSAETSVMVEEGMKIDKGY
MSPHFINNPNKSIVEFENAKVLVTDQKISSVKEIVPLLEKATQLSVPLLIFAEDISSQVL
ETLVINKVQGVLNVAVVKCPGFGAGKKAVLQDIALLTGADFLSGDLGLNLEGATSDQLGI
ARKITITSNSTTIVADPSTKAEIQARIMQIKKDLAETDSKYLSEKLSQRIAKLSGGVAIL
KVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEHVPFIKESFQDPDEQ
IGADIIGMALLAPAKLIAANAGVDGDIVVEEVRGCDWQMGYNAMTGRYEDLLASGVIDPC
RVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPQIPGITP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcactatcaataatttcacctttatacttccctttaaagctttctttctcggaagaa
aaaggaatgtgtaattcgtgggcgttggggcaaagcttagggaagaagaagatgatggtg
gcgagagctgggccaaagagaatagcttttgataaagaatgcagagaagctttactttct
ggtatcaataagattgctgatgctgtttctgtcaccttaggacctaaaggtcgcaatgta
gttctctctgaatctggtgtgctgaaagtaattaatgatggtgttaccatagctcaagcc
atagaacttccagattcaattgaaaatgcaggagtgacacttatcaaggaggttgcaact
aagaccaacagtttagctggggatggtacaactactgcaattgttttggctcgtgagatg
gtcaaagctggtttgctagctgttgcttttggggctaaccctgtttctatgaagaaagga
atggagcagacagtaagagagctggtcaaaattttgaagaagaaaagctatcctgttaga
ggaaatgatgatattaaagctgtagcttcaatatcagctggaaatgatgagttcattggc
agtttgattgctgaggcaattaagaagattggtcccgatggcgtcatatgtattgagtct
tcctcatcagctgaaacctcagtcatggttgaagaaggaatgaagattgacaaggggtac
atgtcaccccatttcatcaacaatcccaacaaatctatagtagagtttgaaaatgccaaa
gttctggtaaccgatcaaaagatatcttctgtcaaagaaattgttcctttgctagagaag
gccacacagctgagtgtgccactgctgatttttgctgaggatatttcaagccaagtgcta
gaaacactagtcattaacaaggtgcaaggagtgcttaatgttgctgttgtgaaatgtcca
ggatttggagcaggaaagaaagctgtattgcaagacattgccctgttgacaggtgctgat
tttctttctggagacttaggcctgaatcttgaaggtgcaacctcagatcagcttggtatt
gctcggaaaataacaataacaagcaattctacgaccatcgtggctgacccctccacaaaa
gctgaaatacaagccagaataatgcagataaagaaggatcttgcagaaacagatagtaaa
tatttgtcagagaagctttcacaaagaatagcaaaactctctggtggtgtggccatattg
aaagtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgca
aaaagtgctacatttgctgccatggatgaaggaatagtgcctggtggtggtgccactttt
attcatctctctgaacacgtacccttcataaaagaatcgtttcaagatccagatgagcag
atcggtgctgacataataggaatggcacttcttgcgccagcaaagctaatagccgcaaat
gcaggagtggatggagatatagttgtggaagaagttagaggttgtgactggcaaatgggg
tataatgccatgactggaagatatgaagaccttcttgcttctggggttattgacccttgc
cgtgtttcaaggtgtgcccttcagaatgctgtctctgttgctggtatagtcctaactact
caagcaataatggtagagaaaaccaaggagcccaaaccgcttgtccctcagattcctggt
ataactccttaa
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