Nicotiana tomentosiformis: 104089830
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Entry
104089830 CDS
T05025
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X2
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
nto03015
mRNA surveillance pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104089830
09122 Translation
03013 Nucleocytoplasmic transport
104089830
03015 mRNA surveillance pathway
104089830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104089830
03041 Spliceosome [BR:
nto03041
]
104089830
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104089830
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
Cap binding complex
104089830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
104089830
NCBI-ProteinID:
XP_009593116
LinkDB
All DBs
Position
8:9333667..9358304
Genome browser
AA seq
862 aa
AA seq
DB search
MSSWKSLLLRLGEKCPEYAGNADFKDQIEACYSAVRRELEHSGDDIFPFLLQCAEQLPHK
IPLYGTLVGLLNLENEEFVAKLVENAQINLQDALETGKCNRIRILMRFLTVLMCSKVIQP
SALVVIFECLLSSAATTVDEEKGIPSWQARADFYITCILSCLPWGGAELVEQVPEEIERV
MVGVEAYLSIRKRVSDAGFSVFEDIEETNNAVNEKDFLEDLWSRVQDLSSRGWKLDSVPR
PHLSFEAQLVAGKSHDLAPVSCPEQPGPSGVLSGIAFGRQKHEAELKYPQRIRRLNIFPS
NKTEDIQPIDRFVVEEYLLDVLLFLNGCRKECTSYMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPTYYTLVIIDLCKALPGAFPAVVAGAVRALFDKIADLDMDCRTRLILWFSHHLS
NFQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENTPALEELLPPR
GGPQFKYSAEDGTDPTERALSVELKDMVKGRKSAREMISWVEENVFPAHGFDITLRVVVQ
TLLDIGSKSFTHLITVLERYGQVIAKICTDDDQQVKLISEVSSYWQNSAQMTAISIDRMM
SYRLISNLAIVRWVFSSSNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSVVL
AEEAASRARDQLDSAESKLSIMDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKE
ALLARAVDEIKVLILSLYKGFLTALAEPLNDAFRDGTLRPSGQADDMKIDLEDSSVMDLD
KDDGGRPKKSHPNGSRERNGYNLDGKQQWCLSTLGYLKAFTRQYASEIWQNIENLDAEVL
TEDAHPLFRKAIYCGLRRPLDE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagagcttgcttttgcgactcggcgagaagtgccctgagtacgccgga
aatgccgacttcaaagaccaaattgaggcatgctatagtgcagttcgccgagaattggag
cattctggagatgatatttttcccttccttctccagtgtgctgagcaattgcctcacaag
attcctctgtatggaacgctggtaggccttttgaatttggaaaatgaggaatttgttgcg
aaattagtggagaatgctcaaattaatttacaggatgccttggagactggaaagtgcaat
aggatccgtatattgatgaggtttctgactgttttgatgtgcagcaaagttatccaaccg
agtgcattagtggttattttcgaatgtttattatcatcagcagcgactactgtggacgag
gaaaaaggaattccctcttggcaagcacgtgctgacttttatataacttgtattttatca
tgccttccttggggtggagctgaacttgttgagcaagttcctgaggagattgaaagggtt
atggttggagtagaagcctatttaagtattcgaaaacgtgtttctgatgctgggttttct
gtctttgaggatattgaagaaaccaataatgctgtcaatgagaaggatttcttggaggat
ttgtggtctcgagttcaagatctttccagtagagggtggaaacttgatagtgttcccaga
ccgcacctctcttttgaggcacaattggttgctggaaagtctcatgatttggctccagta
agctgccccgagcaaccaggtccttctggagttttatctggaattgcctttggtagacaa
aagcacgaagctgagttaaaatatcctcagaggataaggaggcttaatatatttccatca
aataaaactgaggatattcaacccattgatcgctttgttgtggaagagtatttgttggat
gtgcttttattcttgaatggatgtcgaaaggaatgcacttcatacatggttgggctgcct
gtaccattcagatatgaatatcttatggctgagacaatattctctcagcttcttctgtta
cctcaaccgccattcaaaccgacatattacacattggttatcatcgatttatgcaaggct
ctgccaggggcctttccagcggttgtagctggggctgtccgtgctctttttgataaaata
gcagatttagacatggattgccgaacacgtctcatcctttggttctcacatcatttgtca
aactttcaatttatctggccatgggaagaatgggctcatgtgttagatctgccaaaatgg
gccccacagcgtgtgtttgttcaagaggttttggaaagagaagtccgtctttcatattgg
gacaaaatcaagcagagcattgagaacacccctgctttggaggagttacttccaccgaga
ggtggaccacagtttaaatatagtgcagaagatggtaccgatccaactgagcgtgcgctc
tctgtagagcttaaggacatggtgaaaggtaggaaatctgccagggaaatgatttcctgg
gtagaagaaaatgtttttccagcccatggttttgatatcaccctcagagttgttgttcaa
acacttcttgacattggatccaaaagctttactcatttgattactgtcttggagagatat
ggccaagtcatcgcaaagatttgtactgatgatgatcaacaagttaagctgattagtgaa
gtaagttcttactggcaaaacagcgcacaaatgacagctatatccattgaccggatgatg
agttatcggcttatatctaatttggccatagtgagatgggttttctcttcatcgaacctt
gatcgatttcatgtctctgacagtccatgggagatcctcaggaatgctgtcagtaagacg
tataatcggatttctgatctgaggaaagagatttcatcccttgagagaagtgttgtcttg
gcagaagaagctgcatctagagccagagatcagttagattctgcggagtctaagctgagt
atcatggatggggaacctgttcttggtgaaaaccctgtaagaataaaacggctgaaatca
tatgcggaaaaagcaaaagaggaagaggtgtctgttcgtgaatctttagaagcaaaggaa
gctcttcttgctcgagcagttgatgaaattaaggttttgatcctttcattgtataaaggc
ttcttgactgctttagcggaaccccttaatgatgcattcagagatggaaccttgcggccc
tctggtcaggcagatgacatgaagattgaccttgaagattcttctgtaatggacttggac
aaggatgatggtggaagaccgaagaaaagtcatcctaatggaagcagagaaagaaatggc
tataatcttgatggaaaacagcaatggtgtttatcaactctgggttacctcaaggcattc
accaggcaatatgcttcggagatatggcaaaatattgagaatttggatgctgaggtacta
actgaagatgctcatcctctatttcgaaaagctatatactgtggcctgcgaagacctttg
gatgaatga
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