Nicotiana tomentosiformis: 104089953
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Entry
104089953 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104089953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104089953
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104089953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
Zn_ribbon_RanBP
GTP_EFTU_D2
MMR_HSR1
DZR
Vps36-NZF-N
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
104089953
NCBI-ProteinID:
XP_009593265
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Position
12:123479639..123487911
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AA seq
656 aa
AA seq
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MPRKVNYGVNYEEDFYDYEDYNYDYDDGYDSAEKNGRVPGTNTKQEFVKAGIWCCSICTF
DNKDTMNVCDVCGNTKQERVKAGVWRCPICTFDNEDTMNVCDICGVLRNPLIKSCGGSKA
SAATLDKVLQSNVPSSKKELATEVKQELVTEGPASSSASTAKVRRDNMKDRGSSKETRAN
HGVTSNMSNMPMSSNPCNAETRSATSRSQSKSQKIVCPDQLEDRLDQLNLAIVGHVDSGK
STLSGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVAVAYF
NTKSYRVVLLDSPGHRDFVPNMISGATQADAAVLVIDASIGAFEAGIDVTGGQTREHALL
IKSFGVDQIIIAINKMDAVGYSKERFDTIKNQLGSFLRSCKFKDSSVLWIPLSAMENQNL
VTSPSDARLLSWFQGPCLLDAIDSLQPPQRDYSKPLLMPICDLVKSPSQGQVSVCGKLET
GALQVGEKVLVMPSREMATVRSLEHDSQVCNSTKAGDNVTVNLQGIDANRVMAGDVLCHP
EYPIAVTNCLELKILILDIAVPILIGSQLEFHVHHAKEAARVVRILSLLDPKTGKETKKS
PRCLLAKQNAIVEVVLQGMICVEEHSKCKSLGRVSLRASGRTVALGLVTRVLEKYE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtaaattatggtgttaattatgaggaagacttttatgactatgaagat
tacaattatgactatgacgatggatatgattctgcagagaaaaatggcagggtaccagga
acgaatacaaaacaggaattcgttaaggctggcatctggtgttgttccatttgcacattt
gataacaaagatactatgaatgtgtgtgatgtttgtggaaatacaaagcaagaacgggtt
aaggctggggtgtggcgttgtcccatttgcacatttgataatgaagataccatgaatgta
tgtgatatttgtggggtccttcgtaacccattgatcaaaagttgtggcggcagcaaagct
agtgcagctactcttgacaaagtcttacagtcaaatgtcccatcaagtaaaaaagaatta
gctactgaagttaaacaagaactggttaccgaagggcctgctagctcttctgcatcaaca
gcaaaagttagacgtgataatatgaaggatagaggttcttctaaagaaactagggcaaat
catggtgtcacgagcaacatgagcaatatgcctatgtcatcaaatccttgcaatgcggag
accagaagtgcaacttcacgatcacagagtaaatctcagaaaattgtatgccctgaccaa
ttagaagacagattggaccagttaaatctcgcgattgttggccatgttgattctgggaag
tcaacattatcaggaagattattacaccttttggggcagatatctcagaaggaaatgcac
aaatatgagaaagaggccaagcagcaaggaaaggggtcctttgcttatgcctgggcattg
gatgagagtgctgaggaaagagagaggggaataactatgacagtggctgttgcctacttt
aacacgaaaagttaccgtgttgtactacttgattccccaggccatagagactttgtccca
aatatgatatcaggtgcaacacaagcagatgctgcagttctcgtaattgatgcttcaata
ggtgcatttgaagcagggattgatgttactggaggtcagacaagggagcatgcactactt
atcaaaagctttggggtggatcaaataataattgctattaataaaatggatgcagtggga
tactccaaagaacgttttgatacaattaagaatcaactaggatcttttcttcgttcttgc
aagtttaaagattcgtcagtattgtggattcccctgagtgccatggaaaaccaaaatttg
gtgacaagtccgtctgacgcaagattgttgtcctggtttcaaggtccttgccttttggat
gcaatagactctctccaacctccccaaagagattactcaaagcctctattaatgccgata
tgtgatcttgttaaatcaccgtcacaaggacaggtgtcagtatgcgggaagttggagaca
ggagctcttcaagttggagaaaaggttctagttatgccatcaagagaaatggcaacagtg
cgttctttggaacatgattctcaggtttgtaacagtacaaaagctggagacaatgtcact
gttaatctacaaggtatagacgcgaatcgtgtaatggcaggggatgtgctgtgtcaccct
gaatatcctattgctgttacaaattgtttggaactgaagattctcatcctggatattgcc
gttccaattttgattggctctcagttggagtttcatgtacaccatgctaaggaggctgca
agagttgtgaggattttgtcattgcttgatccaaagactggaaaggagaccaagaaatca
cctcgatgtcttctagcaaagcagaatgctatagtcgaggtggtcttgcaaggaatgatt
tgtgttgaagagcattctaaatgtaagtctcttggaagggtgtccctcagggcatcagga
agaactgttgctcttggtcttgtgactcgagttctagagaagtacgaatag
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