KEGG   Nicotiana tomentosiformis: 104089957
Entry
104089957         CDS       T05025                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nto04812]
    104089957
Cytoskeleton proteins [BR:nto04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104089957
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 eIF2A Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 104089957
NCBI-ProteinID: XP_009593301
LinkDB
Position
2:76977828..76990368
AA seq 1027 aa
MAKRGYKLQEFVAHSGNVNCLRFGKKTRRQFLTGGDDQTVNLWSIGKPTSTASLSGHTSP
VESVAFDSAEVLVLAGSSSGVIKLWDLEETKMVRTLNGHRSYCTACEFHPFGEFFASGSM
DTNLKLWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KSHEGHVRSIDFHPLEFLLATGSADRTVNFWDLETFELIGSTRREAAGVRSMTFHPDGRT
LFCGLDDSLKVYSWEPVICHDSVEMGWSTLSDLCIHDGKLVGGAYYQNYVGVWVADISLI
EPYGAGLTPERQSNLEQKQEHVECRLERVGSNRSSNSSLRCTSPDIDSKEIKNIYVDSEN
PVTIKKVTSHSPKVAPPSDYKENKKQSSQKLNSANDLPAKTNGLAVSKSFIVPSVVPRDI
PEAKNLDTCRRESITANRASGGISQKPSHIKRLSNNKFDMEKISVTLESESADKLPCTVD
CKNESDIDSRRMTDNSSRECSEAKDSAVKHGGEKPEKVSLLSPPNNQENRNVALEGRKEL
NPVKFVNGVAVVRGRTRSLVERFEKREGLNMDDILKLDAVSHSKTEEVEISPLAPSCCKD
EEPETFIKKKDEEPETTPSTASRFKAEEATRPLPPSHSGIEEANTCTLPASQYEVEELEA
SNKPDSKFKSEEVKTTHLPASHVEKLEASPMPASQFESEEVRASHLPVSCSKAEEFEASP
KPASQVKSEDVRKSRLPASRSKAEELEASPVPSSQIKPENVRRSRLPASRPKAAELEASP
MPVSKFRTGARTSRLSAFRSKTEEAKTSRLLASRSKAEEAQTFRLLSSGSNAEEPLTAPL
LNTDQQTIAQCESAQNDNFVIEDLMQSHDVLLSSFRSRLTKLQVVRHFWERNDIRGAINA
LRKLPDHSVQADVVSVLVDKMEIITLDLFSCLLPVLLTLLDSKVERHANVSLELLLKLVA
VFGPVVRSAILAPPSVGVDLHAEERIQCCKQCFVYLQDIQKVLPALIRRSGLLAKGALQL
NLLLQES
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggcaaaacgtggctacaaattgcaggaatttgtggcgcattcggggaatgtaaactgt
ttaagatttgggaagaagacacgtaggcagtttctcactggtggagatgatcaaactgtg
aatctttggtccattggtaaaccaacatccaccgccagcctaagtggtcacacgagtcca
gtagaatctgtagcttttgactcagcagaggttctagtgcttgctggatcttcatcaggt
gtaataaagctatgggatctggaagaaacaaaaatggttcgcactcttaatggacacaga
tcgtattgcacggcttgtgaattccatccttttggtgaattttttgcatctggatctatg
gacactaatcttaagttatgggatataagaaagaaagggtgcatccatacgtacaaaggt
cacactcgaggaataagtaccattagattctctcctgatggccgctgggtggtttctggt
ggatttgacaatgttgtgaaggtatgggacctaacagctggaaagctcttgcatgatttc
aagtcccatgaagggcatgttcgatctatagatttccatccacttgagtttcttctggca
acaggttctgcggaccgtactgtaaacttttgggatttggaaacatttgaattgattgga
tctaccagacgtgaggctgcaggtgtacgatcaatgacctttcaccctgatggaaggact
ctgttctgtggactggatgatagcttgaaggtttattcatgggagcctgtaatttgtcac
gactccgttgaaatgggatggtcaactttaagtgatctctgcatacatgatgggaagctt
gtaggtggtgcctattaccaaaactatgttggtgtttgggttgcagatatttcgcttatt
gagccctatggagctggtttaactccagagagacaaagtaacttggagcagaaacaggaa
catgtggagtgtcgtctagaaagagtaggaagcaacagaagttctaattcaagtctgcgc
tgcacatcacctgacattgattccaaagaaataaagaatatatatgtggatagtgaaaat
cctgtaaccataaagaaagttacttctcattctccaaaagtggcccccccttcagattat
aaggaaaacaagaaacagtcgagccagaagcttaattctgccaatgatttacctgcaaaa
actaatggattggcagtaagtaaatcatttatcgtccccagtgttgtgcctcgtgatatt
ccagaggcaaagaacttggatacttgtagaagggaatctattactgcaaacagggcaagt
ggtggtatatcacaaaagccgtctcacataaagcgcttgtccaacaacaaattcgatatg
gagaagatttctgtgactcttgagtctgaatctgctgacaagttgccttgtacagtagat
tgtaagaacgaatcagatattgatagcaggcgtatgacagataatagttccagggaatgt
tctgaggcaaaagattcagctgtcaagcacggtggagaaaagccagagaaagtatcattg
ctatcaccgccaaataatcaggagaaccgtaatgtggccttggaaggcaggaaagagtta
aatccggttaaatttgtgaatggagtggcagtagtgcgaggaaggacacgcagtttggtt
gagagatttgagaaaagagaagggttgaacatggatgatatccttaagctagatgcggtg
tctcattctaaaactgaggaagtagaaatatcccctttggcaccttcctgttgtaaagat
gaggaaccagaaacctttatcaaaaaaaaagatgaggaaccagaaacaaccccttcgaca
gcttctcgttttaaagcagaggaagcaacacggcctttgcctccatctcattctggaatc
gaggaagcaaatacatgtactttgccagcttctcaatatgaagttgaggaattagaagca
tccaataagccagattctaagtttaaatctgaggaagtaaaaacaacccatttaccagct
tctcatgttgagaagttagaagcatctcctatgccagcttctcagtttgaatctgaggaa
gtaagagcatctcatttaccagtttcttgttccaaagctgaggaatttgaagcttcccct
aaaccagcttcacaggttaaatccgaggatgtaagaaaatcccgtttaccagcttctcgt
tcaaaagctgaggaattagaagcatcccctgtgccatcttcacagattaaacctgagaat
gtaagaagatcccgtttgccagcttctcgtcctaaagctgcggaactggaagcatcccca
atgcctgtttctaagtttagaaccggagcaagaacatcccgtttgtcagcttttcgttca
aaaacagaggaagctaaaacatcacgtttattagcttctcgttctaaagctgaggaagca
caaacattccgcttgttgtcttctggttctaatgctgaggaaccattaacagcccctttg
ctgaatacagatcagcagactattgcacagtgtgagtcagctcagaatgataattttgtt
attgaagatcttatgcagagccatgatgtgctactaagttcgtttagatctcggctgaca
aagctgcaggtagttcgtcacttttgggaacggaatgacattaggggtgctataaatgcc
ttgaggaagttgccagaccattccgtacaagccgatgttgttagtgtcctcgtagataaa
atggagattatcacattggatttgttttcctgcttgctgcctgtactgttaaccttactt
gatagtaaggtagaaaggcatgcaaatgtttccctggagctgctgttgaaacttgttgca
gtctttgggccggtagttcgctcagccattttagcacctccatctgtaggggttgatctt
catgcagaagaaagaatccagtgctgcaaacagtgcttcgtctatctccaagatatacag
aaagtacttccagcacttattaggagaagtggtctgttggcaaaaggtgcattacaatta
aatctcctacttcaagaatcgtag

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