Nicotiana tomentosiformis: 104090017
Help
Entry
104090017 CDS
T05025
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104090017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104090017
03009 Ribosome biogenesis [BR:
nto03009
]
104090017
04131 Membrane trafficking [BR:
nto04131
]
104090017
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104090017
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104090017
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104090017
Membrane trafficking [BR:
nto04131
]
SNARE
SNARE associated proteins
Others
104090017
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104090017
Exosome [BR:
nto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104090017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_22
AAA_5
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
Viral_helicase1
AAA_18
Parvo_NS1
ATPase_2
nSTAND_NTPase5
ABC_tran
NB-ARC
NACHT
AAA_7
TsaE
Vps4_C
IstB_IS21
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
104090017
NCBI-ProteinID:
XP_009593345
LinkDB
All DBs
Position
11:complement(112628796..112635382)
Genome browser
AA seq
806 aa
AA seq
DB search
MSHPAESSDSKNATKKDFSTAILERKKAANRLIVDEAVNDDNSVVALHPATMEKLQLFRG
DTILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRV
HILPIDDTIEGVTGDLFESFLKPYFLEAYRPLRKGDHFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIGKDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVS
WTDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSE
NPDSMDEDVDDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFA
EASGGTAAADPFATSNAGGDDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacccggccgagtcatctgactcaaaaaatgctactaagaaggatttttctacg
gcgattttggagcggaagaaagctgcgaatcggctcattgttgacgaggcggtcaacgat
gataactccgttgttgccttacaccctgctactatggagaaacttcagcttttccgtgga
gatacgattctcatcaagggaaaaaagagaaaggatacagtcgtcattgcccttgctgat
gaaacatgtgatgagccaaagattaggatgaacaaggtggtccgttcaaatttgagggtt
cgacttggagatgtcgtatctgtgcaccagtgtccagatgttaagtatgggaagcgtgtc
cacatacttcctatagatgatacaatagaaggtgtcacaggggatctgtttgaatcattc
ctgaaaccctactttttggaggcatatcgtcctttgaggaaaggggaccatttccttgtt
agaggagggatgagaagtgtggaattcaaggtcatagaaactgaccctggggagtattgt
gtcgttgctccagacactgaaatcttttgtgagggtgagcctgtgaaaagggaggatgag
gatagacttgatgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcag
attcgtgaactggtggaattaccattgaggcatcctcaacttttcaaatctattggtgtg
aaaccaccaaaggggattttactttatggacctcccggttctggaaagactctgatagcg
agagctgtcgctaatgaaacaggtgcatttttcttttgcattaatggacctgaaataatg
tccaaattggctggagagagtgaaagtaatctcaggaaggcatttgaagaggctgaaaag
aatgctccttctatcatatttattgatgaaattgattcaattgctcccaagcgagagaag
acacatggtgaagttgaaaggaggattgtctcacaactcttgaccctgatggatggactg
aaatcgcgtgctcatgtaatagtgatgggagctaccaaccgtccgaacagcattgatcct
gctctaagaaggtttggtaggtttgatagagaaatagacatcggtgttccagatgaagtt
ggacgtcttgaagttcttcgcattcataccaaaaatatgaagcttgcagaagaagttgat
ttggaaagaattggaaaagatacacatggttatgttggtgcagatcttgctgctctttgc
actgaagctgcacttcagtgtattagggagaaaatggatgtcattgatctggaagatgat
actattgacgctgagatattgaactctatggctgtaacgaatgagcacttccaaactgct
cttggtacaagcaatccatctgcattgcgtgaaacagtggttgaagtgcctaatgtctcc
tggacagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatat
ccggtggaacacccagagaagtttgaaaagtttggtatgtcgccttcgaaaggtgttctt
ttctatggtcccccagggtgtgggaaaactctacttgccaaggcaattgcaaatgaatgt
caagccaatttcatcagtgtcaaaggtcctgaactgctcactatgtggtttggggagagt
gaggcaaatgttagggaaatttttgataaagctagacaatctgcaccctgtgtcctcttc
tttgatgagcttgattctattgctactcagaggggaagcagtagtggagatgctggtgga
gcagctgatcgtgttctgaaccaacttctgactgaaatggatggcatgaacgcgaagaag
actgtatttataattggggccacgaacaggcctgatataatagaccctgcacttctacga
cctggccgtcttgaccagttaatctatattcctctgccagatgaagattcacgccatcag
attttcaaggcgtgtctgagaaagtctcccttatcaaaggatgttgatttgagagctctt
gccaaatatactcagggatttagtggggctgatatcactgagatctgtcagcgagcctgc
aaatatgccataagggagaacatagagaaagacatagaaagggagaggagaagaagtgag
aatcctgattctatggatgaggatgttgatgatgaagtaccggagatcaagcccgcgcat
tttgaggagtctatgaagtatgcacgacgaagtgttagtgacgctgatatacgtaaatac
caggcatttgctcagacattacagcagtctagaggttttggaacagaatttcggtttgct
gaggctagtggcggtactgctgcagctgacccgtttgcaacttctaatgctggaggtgat
gacgatgacctgtatagctga
DBGET
integrated database retrieval system
