Nicotiana tomentosiformis: 104090131
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Entry
104090131 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104090131
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104090131
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104090131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
104090131
NCBI-ProteinID:
XP_009593479
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All DBs
Position
3:123487894..123494057
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AA seq
378 aa
AA seq
DB search
MAMRGVDFKWYDGFFLSMLATSIIIVAINWKRYHLCIYPLHIWIVVDYTTVFVFRLLMFV
DNGLAAGMGLDFGWQQRYGRFCGRIAVLSILALLLYPFLWAWTIIGTLWFTSARNCLPEE
GQKWGFLIWLLFSYCGLLCIACISTGKWLARRQAHLLRAQQGIPISEFGVLVDMIRVPDW
AFEAAGQEMRGMGQDAASYHPGLYLSQAQREAVEALIQELPMFRMKAVPTDCSECPICLE
EFHVGNEVRGLPCAHNFHVACIDEWLRLNVKCPRCRSSVFPNLDLSALSNIRVDSERSAT
NFVTAARYVRSQPSSQSYLLRLQGFLRPVRTEDAGPSSEVNAAAAQTRVENGALASGPDS
HGNVERVEVLVEHSPRQL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagaggcgttgattttaaatggtacgatgggttcttcttgtcaatgctagct
accagtataattattgtggctatcaactggaagcgctatcatctttgtatatacccattg
cacatctggatcgtggttgactacacaacagtgtttgtgtttcggctcttgatgtttgta
gataatggccttgctgctggaatgggattggattttggttggcagcaaagatatggtcgt
ttctgtggaagaatagctgttctttcaattcttgccctgcttctctatccctttctttgg
gcgtggaccatcattgggactttatggttcactagtgcaagaaactgccttccagaagaa
ggccaaaagtggggtttcctaatttggttgctattcagctattgtggactgctgtgcata
gcttgcatatcgacaggaaagtggttagctagaagacaagcccatttattacgcgctcaa
caaggaattcctatctccgaatttggggtgttagttgacatgatcagagtgccagattgg
gcattcgaagctgctggccaggagatgagaggcatgggccaagatgctgcttcataccat
ccaggactttatttgagccaagctcagagagaagcagtggaggcactcattcaagaactt
ccaatgttcaggatgaaagctgttccaactgactgcagtgagtgccctatctgtttggaa
gaatttcatgtgggaaatgaggttcgtggtttgccttgtgctcacaacttccatgttgca
tgcattgatgaatggcttcgcctaaacgtgaaatgccctagatgtcgtagttctgttttt
ccaaatcttgatctcagtgctttgtcaaatatccgtgttgattcagagaggtcagcaacc
aactttgtgacagcagcccggtatgtgagatcccaaccttctagccagagctatctgctg
aggttgcaaggttttcttcgccctgtgcgcacagaggatgctggcccaagtagtgaggta
aacgcagctgctgctcaaacaagagttgagaacggagccctagcatcaggacctgacagt
cacggaaatgtagagcgtgtggaagtacttgtggaacattctccaagacagctgtaa
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