KEGG   Nicotiana tomentosiformis: 104090218
Entry
104090218         CDS       T05025                                 
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nto00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    104090218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104090218
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    104090218
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Pkinase ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WDR54 Beta-prop_SCAP WD40_like PK_Tyr_Ser-Thr Beta-prop_WDR75_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 104090218
NCBI-ProteinID: XP_070038955
LinkDB
Position
8:complement(139288727..139298803)
AA seq 1049 aa
MMEETVDEAICDEVNGLDAFDGRQLRSKESDYTLRSGNSNMLQSHEVVTLSEGDHYQNTA
NLFTDILDGKNLDRIGSSEHASASPRCMNDAGVMVEELTLRNYNGKNLAVVDTLGNKEIM
QVRPNQWFYKLAGGSACGSSHGEEGDTLFTGLLNQNQKKLNEIRNLDGENLQNNGDKAVS
NNLLPSSEGIRTKIFSKSGFSEYIVKSTLKGKGIICKKQLPRVSASESQGQIYPQCPNAS
STIASVDAFVSPCQGISEMGCSVNPNVYQDGIGLRERLKAGGNKLNKAEGLYIFKQVLDL
VDFAHSQGIILQDLRPSSFKLLHSNQVVYIGASVRTQFTENVIDRGVPQVEHNQKERSSS
GKSISSLIDPCVKKQKLSEDTHVKRKWPQYPFITGHKSACTNTKLNAAQGYGDESNEEDC
LKTELNNSNKFRLPQLSIMPKPLLTSMSFNLEKKWYTSPEQFSEGGCTFSSNIYCLGVLL
FELLSSFDCERSHAAALLDLRHRILPSCFLSEHPKEAGFCLWLLHPEPSARPTTREILQS
EVIGGIKELPGDVSLSSIHEEESESELLLYFLMSLKDQKQKDASKLVEEVKCLEADVQEV
QRRQSSKAPCSSSHQKSLVLWDSRFVRKGVSSSDVYPKLPPDCENETRLIKNIRQLESAY
FSTRSNIQPSDDVAMVRRTEEIFNNQENFVSTGNDNEKYRPTDRVGDFFDGLCKYARYSK
FRVRGILRNADLNNSANVICSLSFDRDEEYLAAGGVSKKIKVFEYHALFNDSVDIHYPVI
EMSNKSKLSCICWNSYIRNYLATTDYDGAVKLWDASTGQAFSHLTEHNERAWSVDFSRVD
PTKLASGSDDHLVKLWSINEKNSVCTIRNNANVCCVQFSPDSSHFLAYSSADYKTYCYDL
RNISAPWCILAGHEKAVSYAKFLDAETLISASTDNSLKIWDLNKTNSSGYSADACVLTLK
GHTNEKNFVGLSVSDGYITCGSETNEVFSYYKSLPMPITSHKFGSIDPISGKETDDDNGQ
FVSSVCWRQKSNMVLAANSSGCIKLLEMV
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgatggaagaaactgttgatgaagctatttgtgatgaggtgaatggactggatgccttt
gatggtagacaacttcgaagtaaggagagtgactatactttgaggtccggaaattccaat
atgctgcaatcacatgaagtggtcacacttagtgaaggtgatcattaccaaaatactgcc
aatttgtttacagatatcctcgatggtaagaatctggacagaattggatcttcagaacat
gcaagtgctagccctcgttgtatgaatgatgctggggtcatggttgaagaattgactctg
agaaactacaatgggaaaaacttggctgttgttgataccttgggcaataaagaaataatg
caggttaggccaaaccagtggttttataagctagcaggtggatctgcatgcggaagctca
catggggaagagggagacacattatttaccggacttctgaatcagaatcagaaaaaattg
aatgaaattcgtaatctagacggagaaaatttgcagaataatggtgataaagctgtttcg
aacaatttattaccctcttctgagggtatccggacgaagattttttctaagtcgggtttt
tctgagtatattgtgaaaagcacattaaaaggcaaaggaatcatatgcaaaaagcagtta
ccccgagtatctgctagtgagtctcaaggccagatttatccgcagtgtcctaatgcttct
tccaccattgcaagtgtggatgcatttgtttcaccttgtcagggtatctctgaaatgggc
tgcagtgttaatcccaatgtctatcaagatgggataggtttaagagaacggctgaaagct
gggggaaataaattgaacaaagctgaaggcttgtatattttcaaacaagttctggatttg
gtggattttgctcactctcaaggaattatcttacaagacttgcgtccatcttcctttaaa
ttgttgcactcaaaccaagttgtatatattggagcatctgtacgcactcagttcactgaa
aatgtgattgatcgaggtgttcctcaggtggagcataatcagaaagagaggagttcatct
ggaaaaagcatttcttccttgatcgatccttgtgtaaagaagcaaaaacttagtgaagac
acccacgtgaaaaggaagtggcctcaataccccttcattacaggccataaatctgcttgc
acaaacactaaattaaatgctgcacaaggctatggagatgagtcaaatgaagaggattgc
ctcaagacagaacttaacaactcgaacaagtttagattgcctcaactatccattatgcca
aaaccattgctgacttccatgagctttaatttggagaagaagtggtataccagtcctgag
cagttcagtgagggtggctgcacattttcatcaaacatctactgcctgggggttcttctc
tttgagttgcttagctcatttgactgtgaaaggtctcatgcagctgcactgctggatctt
cgccataggattcttccctcttgtttcctgtcagaacatcccaaagaagctggattttgt
ctttggttgcttcatccagaaccttcagcacgtccaacaacaagggaaattttacagtct
gaagttattggtggtattaaagaattacctggagatgtatcactgtcgtctattcacgaa
gaggaatctgagtcagagttgttgttgtacttcctcatgtcactgaaagatcaaaagcag
aaggatgcctcaaagctagtggaagaagtcaaatgtttagaagcagatgtccaagaggtt
cagaggcgccaaagcagcaaagccccttgttcgtcctcacaccagaaatctcttgttttg
tgggatagcaggtttgttcggaaaggagtatcaagttcggatgtgtatccgaagcttcca
cctgattgtgagaatgaaactagattgatcaagaatatcaggcagcttgaaagtgcttac
ttctctacgcgatccaatattcagccttctgatgacgttgccatggtccgcagaactgaa
gaaatctttaataatcaggagaactttgtctcaacaggaaatgataatgagaagtataga
cccacagatcgggttggggatttttttgatggcttatgcaagtatgctcggtatagcaag
ttcagagtaaggggaatattaagaaatgcagatctgaataactctgcaaatgtcatatgc
tctctaagcttcgacagggatgaggaatatttagctgctggtggggtatcgaagaaaatt
aaagtatttgagtatcatgccctctttaatgattctgttgacattcattacccagttatc
gagatgtcaaacaaatctaagctcagctgcatttgctggaacagctatatcaggaactat
ctggctaccactgactatgatggtgctgttaagttatgggatgcgtctactggtcaagct
ttttcgcatttgactgagcataacgaaagggcatggtcggtagatttttctcgtgtggat
cccacaaagttagccagtggaagtgacgatcatttggtgaaactttggagcatcaacgag
aagaacagcgtgtgcacgatcagaaacaatgcaaatgtttgctgcgttcagttttcacct
gactccagtcattttctggcttatagctctgctgattacaagacttattgctatgatctt
cgaaatatctcagctccttggtgtatattggctggccatgagaaagctgttagttatgca
aaattcttggatgctgaaacgctcatttctgcatccactgacaacagcctgaagatatgg
gatctcaataaaaccaactcaagtggctattcagccgatgcttgtgtcttaacccttaaa
gggcacaccaatgagaagaactttgtgggattgtctgtgagcgatggatacataacttgc
gggtcagaaacaaatgaggtcttctcttattacaaatctctgcctatgcctattacttct
cacaagtttggctcgattgatccaatctctggtaaagagactgatgatgacaatgggcag
tttgtttcaagtgtttgctggagacagaagtcaaacatggttcttgctgccaattccagt
ggctgcataaaactactagagatggtttag

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