Nicotiana tomentosiformis: 104090271
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Entry
104090271 CDS
T05025
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104090271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104090271
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
SR proteins
104090271
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_4
zf-CCHC_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104090271
NCBI-ProteinID:
XP_009593629
LinkDB
All DBs
Position
7:114710052..114714681
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AA seq
317 aa
AA seq
DB search
MPRYDDRSGNSTRLYVGHLSSRTRSRDLERVFSKYGRVRDVDMKHDYAFVEFSDPRDADD
ARYYLDGRDVDGRRIIVEFAKGVPRGPGGSREYLGKGPAPGSGRCFNCGLEGHWARDCKA
GDWKNKCYRCGERGHIEKKCPNSPKKLSRRDRSYSRSPVRSRSRSRSPRRRSYSRSRSYS
PSRSPPPRRGKADLEKRSRSYSRSPEPRKESPSPSPSPPPKTRKHSPTPEEGSPMEAMRT
TTGEEGSYSQSPRERSASPLSPRRGDSPAPERDEDSPAEANGGSRSLSPKYQRNRADDDE
DEGEYNNQRSGRESESP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcggtcgggaaatagcacccgtctctatgtgggccacttgtct
tcacggacccgctcacgtgatctggagcgtgtattcagtaaatatgggagagtacgagat
gtggatatgaagcacgactatgccttcgtagaatttagtgatcctcgagatgctgatgat
gcaagatactatttagacggccgtgatgttgatggccgccgcataattgtggaatttgcc
aagggagtgccacgtggacctggtggttcgcgtgagtatcttggcaaaggacctgctcct
gggtcaggccgctgcttcaactgtggccttgaaggtcactgggctcgagattgcaaagct
ggggattggaagaacaaatgttatcggtgtggagaaagaggtcatatagaaaaaaaatgc
ccaaatagtcctaaaaaactcagtcgacgggatcggagctactcacggtcacctgtcagg
tcaaggtcacgttcacgttctcctcgtcgtcgaagttacagcagaagccgcagctatagt
ccatcaagatctcctcctccaaggagaggaaaagctgacctagagaagaggtcaagaagc
tacagtaggagccctgagccaaggaaggaaagtccaagtcctagtccgagtcctccaccg
aagacaaggaagcacagcccaacacccgaagagggaagccctatggaagcaatgaggacg
accaccggagaagaaggtagctatagccaaagccccagagagagaagtgcaagtccttta
agtcctagacgaggggatagccctgcacctgaaagggatgaggacagccctgctgaagct
aacggtggaagtcgcagcctgagtcccaagtaccagaggaaccgtgcagatgatgacgag
gatgaaggtgagtataataatcaacgctcaggcagagagagcgagtcgccttga
DBGET
integrated database retrieval system
