Nicotiana tomentosiformis: 104090522
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Entry
104090522 CDS
T05025
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
nto04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104090522
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104090522
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104090522
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104090522
03036 Chromosome and associated proteins [BR:
nto03036
]
104090522
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104090522
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104090522
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104090522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
104090522
NCBI-ProteinID:
XP_009593925
LinkDB
All DBs
Position
12:117863583..117871837
Genome browser
AA seq
521 aa
AA seq
DB search
MKGGVGGDVAAAPAGPPPSPSLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATG
DRGGRVVLFERTDTKEHVGSRRELERVDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEE
KINKIRWCQTANGALFLLSTNDKTIKYWKIQEKKVKKISEMNIDPSKAAGNGSVTSSSVC
SSPNQCLANGGYGDKSYSSLGNDLSFPPGGIPSLRLPVVVVTSNETSLVARCRRVYAHAH
DYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHP
THCNMLAYSSSKGSVRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKN
GRYILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGMR
VATGSYSNLFRVFGCPPGSTEAITLEASKNPMRRQVQTPSRPSRSVSSSITRVVRRGADS
AGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggtgttggtggagatgtcgcggcagctccggcgggtccaccaccgtcgccg
tctctggaatggaaattttctcaggttttcggtgaacgtacggctggagaagaagtgcag
gaagttgatatcatttcagcaattgagtttgataaaactggtgaccatcttgccaccggg
gatcgtgggggtagggtggtattatttgaaaggaccgataccaaggagcatgttggaagt
cgacgagagttagagagagtggactatccagtcagtcggcatcctgagtttcgctacaag
acagaatttcaaagccacgagcctgagtttgattatctgaagagtttggagattgaggag
aaaatcaacaagatccgatggtgccaaacagcaaatggtgccctctttcttctatctact
aatgacaaaactatcaagtattggaagatccaagagaagaaagttaagaaaatatctgaa
atgaatattgacccttccaaagctgctggaaatggcagtgtaaccagttcgagcgtatgt
tccagcccaaaccagtgtcttgcaaatgggggctatggagataaatcgtacagttctttg
ggcaatgatttgtcctttccacctgggggaatcccctcactacgtttgccggtggttgtt
gttacaagcaacgagaccagccttgttgcgaggtgtagaagagtgtatgcacatgctcat
gactatcatatcaattctatatcaaataacagtgatggcgaaacattcatatcagccgat
gatctccgaataaacctttggaacttggaaataagtaatcaaagtttcaatattgtggat
gtcaagccaacaaatatggaagatcttactgaggtgataacttcagcagaattccatcct
acacattgtaacatgttagcttatagtagttcaaaaggatcagttcgtctaatagatttg
cggcagtcagcattgtgtgactcacattctaaattgtttgaggaacaggaagcacctggt
tcaagatcttttttcactgagataattgcttcaatttcagatattaaatttgcaaagaat
ggacgatacatacttagtcgtgactacatgacccttaagctatgggacataaacatggat
tctggtccagtttcaacattccaggttcatgaatatttaagaccaaagctttgtgactta
tacgagaatgattccatctttgataaattcgagtgttgccttagtggtgatggtatgcga
gtagcaactggatcttacagcaatcttttccgcgtgtttggttgtcctccggggagcact
gaagcaattaccctggaagcaagcaaaaaccctatgagaaggcaagtccagactccttca
aggccttccaggtctgtgagcagcagtataacacgtgttgtccggagaggagcagatagt
gcaggtgttgatgcaaatggaaactcatttgatttcacaacaaaactgcttcatctggca
tggcatccaactgaaaattccatagcctgtgctgctgcaaacagcttgtacatgtattac
gtataa
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