Nicotiana tomentosiformis: 104090523
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Entry
104090523 CDS
T05025
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104090523
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104090523
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104090523
NCBI-ProteinID:
XP_009593929
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All DBs
Position
12:117872867..117876307
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AA seq
383 aa
AA seq
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MMKTNKPSYFMLTLLFTILITISSTSFVHGFNVIDKCWRTDPNWRNHRQQLAKCSVGYSG
KMTNNIGPDVVQYMVTDPSDDPLNPKPGTLRYAMTHINGKVWVTFQRDMTIRLQNPLLVS
SFTTIDGRGVKVNIADGACLMLQRVTNVIIHGLKIHHCKAQTASTVLGPDKKIVNVGPVD
GDAIRMLTSSNIWIDHNTLFDCEDGLIDVTRGSTDITISNNWFRTQNKVMLLGHDDGFLR
DKNMKVTVAFNYFGPNCNQRMPRVRHGYAHVVNNLYKGWGNYAIGGSMNPSIKSQANYFI
APKGGKKEITWRKQGGVGEVSWNFQSVEDVFENGASFSESGSGRESVKPNYLPDQAFPVE
EGKNVKALTRNAGALKCSSTSNC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaactaacaagccttcatatttcatgttaactcttctatttactatactaata
acaatttcaagtacaagttttgtgcatggatttaacgtgattgataaatgttggagaaca
gatccaaattggaggaatcacaggcaacaattagctaaatgttctgtgggttattctgga
aagatgactaataatattggacccgacgtggtacaatatatggttacagatcctagtgac
gatcccctaaaccctaaacccggaaccctcagatatgcgatgacacatatcaatggaaag
gtttgggtaactttccaaagagacatgactattaggctccaaaaccctctcttagttagc
agtttcacaaccattgatggccgtggagttaaggttaacattgctgatggtgcttgtcta
atgctccaaagggtgacaaatgtgataattcatggtctaaaaatccaccattgcaaggca
caaacagcatcaacagtcttaggacctgataagaaaatagtaaatgtgggtccagtggat
ggagatgcaattagaatgttgacttcttccaatatttggattgaccacaatacccttttc
gattgtgaagatggtttaattgatgtcactcgtggttctactgatattaccatttccaat
aattggtttaggacccaaaataaggttatgttattaggtcatgatgatggatttctaaga
gacaagaacatgaaggttactgttgcattcaattattttggtcctaattgcaaccagaga
atgccaagggttcgccatggatatgcacatgtggtaaacaatctatacaagggatgggga
aactacgcaatagggggaagcatgaacccaagcattaaaagccaagccaattatttcatt
gcacctaaaggaggaaagaaagagataacatggagaaagcagggtggagttggtgaagtt
tcatggaatttccaatctgttgaagatgtatttgagaacggagcatctttcagcgaatcg
ggttcgggtcgtgagtccgtgaagcctaactatctaccagatcaagcttttccagtggaa
gaaggaaaaaatgtcaaggccttgactagaaatgctggtgctctaaaatgttcctctact
tctaactgctga
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