Nicotiana tomentosiformis: 104090723
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Entry
104090723 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104090723
03036 Chromosome and associated proteins [BR:
nto03036
]
104090723
Spliceosome [BR:
nto03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104090723
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104090723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
UTP6_C
ARM_TT21_5th
TPR_15
xRRM
Motif
Other DBs
NCBI-GeneID:
104090723
NCBI-ProteinID:
XP_009594186
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All DBs
Position
1:complement(21979622..21992796)
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AA seq
858 aa
AA seq
DB search
MAETVTLDSTTHPPQLPDENPTGNDDEDMLDAPKSTKSSDSDSDSDSDSEDDAQQNLQIQ
ALQTELLNNPSNYDAHVQYIKALRKQGDIEKLRQAREAMNAIFPLSSEMWQEWTKDETSL
SSGPEALPAIEKLFEHGVSDYLSVALWCDYLSFVQEHDQSVRTRSVGGISKARNLFERAL
VAAGLHVTEGSRIWELYREFEQDVFLTIDETDADLREKQVQRIRNLFHRQLSVPLADLSS
TLHTYKAWEAKQGADLDADSSNLDGLPPHVASSYQKALDMMNARTHLENQISCKVAPESE
RLQNFMAYLKFEQSLGDPSRIQILYERAITEFPISSELWLDYTHYMDKTLKTSSLVRDIY
KRATRNCPWVGDLWVRYLLSLERSRASEEELSAVFEKALQCTFSSFEEYLDVFLTRVDGL
RRRLSSLESGPESSDLDYIIIRETFQRASDYLSPHLKNTESLLRMYRYWTRLESTLGKDS
AAARGVWESLLKISGSTLEAWQGYIAMEVEMGNINEARSLFKRCYSKRFPGTGSEDICNS
WIRFEREYGALEDFDLAVKKVTPRLEELQLFKLQEAKNIGLPADDRDNSSRKNVREKRKP
VSNLIEEQSPAKRHKDKAKNVKITYEDGKGQAKDSVKVNNTNPDVDASKPASGSKKENKD
VSSGKPKQYNDQCTAFVSNLNLKATYDDLRRFFSDVGGVVAIRILNDKFTGKSRGLAYVD
FSDDKHLAAAVAKNKQTLLGKRLSIAKSDPKGRKKGSDSHSVSSRQGEGAEQTTESSKSG
AKDSAEGSKEGKGHQGQPSSHQRASNIQLKGKNTFAVPRTVRPLGWVDKDKPISEETDAA
EDEIPKSNDEFRKMFIKS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccgtaaccctagattccactacccatccacctcaacttcccgacgaaaat
cccaccggaaacgatgacgaagacatgctcgacgcccctaaatccactaaaagttccgat
tcggattccgactccgattccgactcagaggatgacgcacagcaaaatctacaaattcaa
gctctacaaactgagcttttaaataacccttccaattacgatgctcatgttcaatacata
aaagctttaaggaagcaaggggatatagagaagcttagacaagcaagggaagccatgaat
gctatttttcctttgagttctgagatgtggcaggagtggactaaagacgagacatctctt
tcttcgggacccgaggctctccctgcaattgagaagctatttgagcatggggtgtctgac
tatctttctgttgctttgtggtgtgactacttaagttttgttcaagagcatgaccaatca
gtccgtacacgttccgtcggtggaatttcaaaggcaagaaatctctttgagcgtgccctt
gtagctgccggtttgcatgttactgaaggcagcaggatatgggaattatacagggaattc
gaacaagatgttttcctcacaattgatgaaactgatgcggacttgagagagaagcaggtc
cagcgtattaggaatttattccatcgccagttgtctgtccctcttgctgatctaagttca
actcttcacacatacaaggcttgggaagcaaaacagggagccgatcttgatgcagactcc
agtaacttggatgggcttccgccacatgttgcctcttcatatcagaaggccctcgacatg
atgaatgccaggactcatcttgagaatcaaatatcttgtaaagttgcacctgaatcggaa
aggcttcaaaactttatggcttacttaaaatttgagcaatcattgggggatccatcgagg
atacagatcttatatgagcgtgccataactgaatttcctatatctagtgaactctggctt
gattatactcactacatggataaaaccttgaagacctccagtcttgttcgggacatttac
aaaagggcgacaaggaactgtccctgggttggagacctgtgggtgcgatacttgctgtct
cttgaacgcagtcgtgcttctgaggaagagctatctgctgttttcgagaaggccctacag
tgcactttctcaagctttgaagagtatcttgatgtatttctcacaagagttgatggctta
aggcggaggttgtcttcgttggaatctgggcctgaaagcagcgacttagattatataatt
atacgggaaacttttcagcgtgcatcagattatttgtctccacatctgaagaatacagaa
agtttattgcggatgtacagatattggacccgcttagaatcaactctggggaaagattca
gctgcagctcgtggtgtctgggagagcctgcttaaaatcagcggatctacgctagaggcg
tggcaaggatacatagctatggaagttgagatgggtaatattaatgaagcacgatccctc
tttaagagatgctacagtaaacgatttcctgggactggctccgaggacatatgcaattca
tggattcgcttcgagagagagtatggtgcacttgaagactttgaccttgccgttaaaaag
gtcactcctcgccttgaagaactgcagttattcaagttacaagaagctaagaacattggt
ctgccagcagatgatagagacaattcctcgaggaaaaatgtgcgtgaaaagaggaagcca
gtatcaaatttaattgaagaacaatctcctgctaaacgtcacaaagataaggctaagaat
gttaagatcacttacgaagatggtaaaggccaagctaaagactcagtgaaggtaaataat
acaaatccagatgtggatgccagcaaaccagcgagtggaagcaaaaaagaaaacaaagat
gtttcttccggaaaaccaaagcagtataatgaccagtgtactgcatttgtatctaatctt
aacctcaaggcaacgtatgacgacctacgcagattcttcagtgatgtcggaggagtggtt
gctatacgaatattaaatgacaagttcactggaaagtcaaggggattggcttatgtggat
ttctcggatgacaaacacctggctgcagccgtggcaaaaaacaagcagaccttgcttggg
aagagattgagcattgctaagtcagatcccaaaggcagaaaaaaaggaagcgattctcac
agtgtgtcttcaagacaaggtgaaggtgctgagcaaactactgagagttcaaaatcaggt
gccaaggattctgctgaaggttctaaggagggcaaggggcatcaggggcaaccttccagt
catcagcgggcatctaatatccagctcaaaggtaagaatacgttcgcagtgcccagaact
gtcaggccccttggttgggttgacaaagataaacccatatcagaagaaactgatgctgcg
gaagatgaaattcctaaatccaatgatgaatttcggaaaatgttcatcaaatcttga
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