KEGG   Nicotiana tomentosiformis: 104091046
Entry
104091046         CDS       T05025                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:nto00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    104091046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nto04131]
    104091046
   03029 Mitochondrial biogenesis [BR:nto03029]
    104091046
Membrane trafficking [BR:nto04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    104091046
 Others
  Specific organelles associated proteins
   Auto phagosome
    104091046
Mitochondrial biogenesis [BR:nto03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    104091046
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd DSE1_N ATG16 ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR35_TULP_N ASA1 Beta-prop_Aladin CFAP251_N Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_DCAF4 PAC11 Beta-prop_HPS5 Beta-prop_NOL10_N WDR54 Beta-prop_SPT8 Beta-prop_EIPR1 Cytochrom_D1 eIF2A PROPPIN WD40_RFWD3 Ge1_WD40 Beta-prop_Vps41 TRM82_WD CCDC171 B-prop_COPA_B_2nd Small_EgtBD Rab11-FIP3
Other DBs
NCBI-GeneID: 104091046
NCBI-ProteinID: XP_009594594
LinkDB
Position
3:complement(110387504..110392672)
AA seq 509 aa
MSYEEVAVGAIRDALKALRKRHLVEEGAHAPAFLALTRPLVLQGSEWKEKAENLEVELQQ
CYKAQARLSEQLVVEVAESRASKSLVQEKESIITDLQIELNQSRDECSRLTELLTEKTKA
LELLMGEHQDLKAQLEAMTLRANNAEAENKTLVDRWMLQKMQDAERLNEANALYEDMLDK
VKATSIEKLARQQVDGVVRQSEDGADFYAESSLPSICKQRIPAHDGGCAAILFEYNSSKL
ISSGQDRAIKMWDTTSGSLSNSLYGSLGSVLDLSITHDNKLIIAASSSNNLYVWDANSGR
IRHTLTGHIDKVCAVDVSKFSSRYVVSAAYDRTIKVWDLQKGYCTNTIIFHSNCNSLSFS
MDGLTICSGHVDGSLRLWDIQTGKLLSEVAAHSQAITSVSVSRNGNVILTSGRDNVHNLF
DIRTLEICGTFRANENRVASNWSRSCISPDDSYVAAGSVDGSVHIWSVSNARMVSTLKEH
TAPVLCCSWSGLGKPLATSDKSGIICIWS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcatacgaagaagttgctgttggagcaattagggatgctttaaaggctctaagaaag
cggcatttagtggaggaaggggctcatgcccctgctttccttgccctcacgaggcctctc
gttttgcagggttcagagtggaaagagaaagctgaaaatcttgaagtggaacttcagcaa
tgttacaaagctcaagcacgactgtcggagcagcttgtggtggaagtagctgaatctaga
gcatcaaaatctttagttcaagagaaggaaagtatcattactgaccttcagatcgagcta
aaccaatcaagggatgaatgttctcgtttaactgaacttctcactgaaaagactaaagct
ttggagttgcttatgggtgagcaccaggaccttaaagcacaacttgaagcaatgactctg
agagcaaacaatgctgaggcagaaaataaaacgctggttgatcgctggatgctgcagaag
atgcaggatgcggagcgccttaacgaggctaatgctctctatgaagatatgctggataag
gtcaaggccaccagtatagagaaacttgctcgtcaacaagtagatggtgtggtccgccaa
agtgaagatggtgcagacttttatgcggagtcttcccttcctagtatatgcaagcaaaga
atccccgcccatgatggtggatgtgccgcgattctttttgagtacaactccagtaaattg
ataagcagtgggcaggacagggcaattaaaatgtgggatactacaagtggatcattaagc
aacagtctttatggttccctgggttctgtccttgatctttccattacacatgataacaaa
ctcatcatagcagcaagtagttcaaataacttgtatgtgtgggatgcaaattcaggcagg
atacgacatactcttactgggcatatagacaaagtttgtgctgtagatgtaagcaaattt
tcaagtcgctatgtggtgagtgctgcatatgatcgtaccataaaagtttgggatctgcag
aagggttactgtactaacactattatcttccacagtaactgtaacagcctttcgtttagc
atggatggcctgaccatttgttccggtcatgtagatgggagtcttagattatgggatatt
cagacagggaagcttctgagtgaagttgctgcacattcacaggctattacatcagtttca
gtctctcgaaatggaaatgtaatattaaccagcgggagagacaacgtgcacaatctcttt
gatattcgtacccttgaaatttgtggcactttcagagcgaatgagaaccgagttgcatct
aattggagtcgatcctgtatcagtccagatgatagttatgttgctgctggttctgttgat
ggatctgttcatatttggtcagtatcaaacgctagaatggtaagcactttgaaagaacac
acagcccctgttctatgttgttcatggagtggtcttggtaaacctctggctacctcggat
aagagtggaatcatatgtatttggtcatag

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