Nicotiana tomentosiformis: 104091081
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Entry
104091081 CDS
T05025
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
nto03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104091081
03460 Fanconi anemia pathway
104091081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104091081
03036 Chromosome and associated proteins [BR:
nto03036
]
104091081
03400 DNA repair and recombination proteins [BR:
nto03400
]
104091081
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104091081
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104091081
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104091081
FA (Fanconi anemia) pathway
Downstream FA components
104091081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
104091081
NCBI-ProteinID:
XP_018624600
LinkDB
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Position
3:complement(420982..430330)
Genome browser
AA seq
1137 aa
AA seq
DB search
MPTWQLYSVAGNDFRWKISDEETKIVEPSLALAAPQQLQSMADLLRQGSSKLAGSSDTSF
TANFPVFRTGSGKPVAVKQSSISRALSILNDKNNVVPDTGQGIGRENSFALQEAAFQKGS
GKALNAPESFSPSGLEKQFNTSNSMFQTGSGKAVSISSAGLNRAKALLGLEEKGDNETFQ
GFEKKNRSSDEHFGFRSSVPFVAVEGIANTWSTKASAASLSPFDVKFNSSVCAAEELVPD
FLHCADKPPPIKFHTAGGRSISVSSEALKRARSLLGDPELGCLVDEKDVVDPLFSFPKDQ
KSVDQSSIKELNSDTPVSLLSAAKGSGSLSLFTPPFGSTLYHKKSSVRTENLTPASNLMK
EFDAVAKESTSRLDHSIPQHGEAFNKNSAAVDLKENDIPSKPKLLQRPSRGSLVDISNNI
GAGSADRNQNFGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLPSQK
GKVSVRYPFHVARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIG
VKSFWEMLFQSGASMQYVSKEWVTNHYKWIVWKLSSYERCYSAKFSGKLLTICNVLEELK
YRYEREVNYGHRSAIKRILEGDVPPSSMMVLCVSKVHSICNSPVGPQFSLSNTTENGACA
KIELTDGWYSITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEASGTTSLL
LHINGTYRAHWASRLGLCKGGAIPLSFLSIKDGGGSVPLTLVGISRIYPVLYRERLSNGG
FVVRSERMEAKEMQSFNQRRYRVVEGITSESQRVKRDAYIGSDHESEEGARILKILERAA
EPELLMAEMSKEQLNAFASYQAKLEASRQYDLQKSLEKALQAAGLAERDVTPFMRVRVVG
LTSKSTPSKCCPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDSSTLYLQAKGSTA
KWRPLSPMAIEGFEPFFCPRRSVPLSKLGEVPMTREFDIAAVVVFVGQLYTEAHQSKQWV
FVADGSTSTLDSNDESETLMATSFTSPCIETDSFAPINSNLVGSVVSFWNLIKRARDNVN
NLWVAEATENSTYYLNFDHSHCSHLKEASASAERWAKISGSRLERLRGKVLSIISCR
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgtcgccgggaatgatttccgatggaaaatctccgat
gaagagactaaaatcgtagagccgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagttcgaaattagcggggagtagtgatacaagtttc
acggcgaatttcccagtttttcgaactggatccgggaagcctgtggcagtgaagcagtct
tcgatatcaagagctctttcgatccttaatgataaaaacaatgtggtcccggacacagga
caagggattggaagagagaacagttttgccttgcaggaagctgcattccagaaaggctca
gggaaagctcttaatgccccagaatctttttccccttctggcttggagaaacaatttaac
acgtcgaactcaatgttccagacaggctctggtaaagcagttagtatatcttccgcaggt
cttaatagggccaaggcattgttgggcttggaagaaaagggtgacaatgaaacatttcaa
ggttttgaaaagaaaaatagatcttcagacgagcactttgggtttcggagttcagttcct
ttcgtggcagtagaggggattgctaacacatggtctactaaagcttcagcagcttcattg
tctccgtttgatgttaaatttaactcctcagtttgtgcagcggaggagttagtaccagat
tttctgcattgtgcagataaacctcctccgataaagtttcatactgctggtggtagatca
atatcagtttcttctgaggcattgaaacgtgcaaggagtctgcttggagatccagagctg
ggatgtcttgtagatgaaaaggatgtggttgatccattgttttcttttccaaaagaccaa
aaatctgttgatcagtcctccattaaagaattaaactcagatactcctgtttccctctta
tcggcagcaaaaggcagtggctcgttaagcctttttacacccccatttggatcaactttg
taccataagaagtcttctgttagaacagagaatctcactccagcaagtaacttgatgaag
gagtttgatgctgtggcaaaagaaagcacgagtaggctggaccatagtattcctcagcat
ggagaggcattcaacaagaactcagcagctgttgacctaaaagaaaatgacatcccttca
aaacctaaattgctacaaaggccttctaggggttctttggtggatatctcaaataacatt
ggagctggatctgcagatagaaaccaaaactttggtcagaagaggaaacctggaagggga
agttttgtttctccattcaagaagcctcgaattgccaaaattgtcacccctctcaaaaga
aacgattccggtgcttctaatggattctcaaattcagcaccacaattaccctctcaaaaa
ggaaaagtttcagttcgatatccattccacgttgcacgattgtatatgaaggagtatctt
ggggaccccccatcattccagagcaagctagagaatctgccagatgaagtgagaaggatg
aatccagatattgctgaaactcatgtgttcaatgataaatcttgctcaggttgcattgga
gtaaagtctttctgggagatgctgtttcaatcaggggcttctatgcaatatgtctctaaa
gagtgggttacaaatcactataagtggattgtttggaaactttcatcttatgagaggtgt
tatagtgccaaattttctgggaagcttttgacaatctgcaatgtacttgaagaattaaag
tacagatatgaaagagaagtaaattatggtcatcgatctgcaattaagagaattctagaa
ggagacgtcccaccttcttctatgatggtgctctgcgtttccaaggtccattcaatttgc
aactccccagttggacctcaattttctttgtctaacacgaccgaaaatggagcttgtgca
aaaattgaactgacagatgggtggtattcaattactgctgtcttagatatactattatcc
aagaagttggctgctggaaagctgtttgttggccaaaagcttaggatctggggagctcga
ttctgtggttggacaggtcctgtttcaccacttgaggcatcaggaacgactagtttgcta
ctgcatataaatgggacatatagagctcattgggcatctcgtttggggttatgtaaaggt
ggtgccattccattatcatttttatcaatcaaggatggtggaggttctgttccacttaca
ttggtcggaatttcaaggatatatcctgttctctacagggaaaggttaagtaatgggggt
ttcgttgtaagatctgaaaggatggaagctaaagagatgcagtcttttaatcaaagacgc
tatagagttgtggagggaataacttcagaatctcaaagggtaaagagagatgcgtacatt
ggaagtgaccatgaaagtgaagaaggggcaagaattttgaagatactagagagagctgca
gaaccagaacttctgatggcagagatgtctaaagagcagttgaatgcatttgcatcctat
caagcaaagttggaggcatcgaggcagtatgacctgcagaaatctcttgaaaaagctttg
caagctgctggacttgctgaaagagacgtcactccttttatgcgagttagagttgttgga
ttgactagcaaaagtaccccatcgaagtgctgcccacaggaaggcttaattacaatttgg
aatccaactgagaagcagcaatccgagcttgcagagggtcaagcttttgctgttacaggg
cttacaccgataagctcagactcgagcaccctttatttgcaagcaaaagggtccacagcc
aaatggcggcctttgtctcctatggcaattgagggttttgagccctttttttgtcctcgc
cgatcagttccattgagtaaattgggtgaagttcctatgaccagggagtttgatatcgct
gcagtggttgtttttgtggggcagctgtatacagaagctcatcaaagtaagcagtgggta
tttgtagctgatggatccacatctacgttggattccaatgatgaatcagaaaccttaatg
gccactagcttcacctcaccatgcatagaaactgattcatttgcaccaataaactctaac
cttgtagggtctgtggtttccttttggaatctcatcaagagagcaagagataatgttaat
aacctctgggtagctgaagcaacagaaaattcgacctattatttaaattttgatcattca
cattgttctcatctgaaagaagccagcgcttctgctgaaagatgggcaaagatatctggt
tcgagacttgaaaggcttagggggaaagttctatctataattagctgccgctga
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