Nicotiana tomentosiformis: 104091089
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Entry
104091089 CDS
T05025
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104091089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104091089
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104091089
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104091089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
104091089
NCBI-ProteinID:
XP_009594641
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All DBs
Position
6:complement(133199561..133201103)
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AA seq
275 aa
AA seq
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MSLLPKSDSIHIREVWSDNLEQEFDLIREIVDEYPYIAMDTEFPGVVLRPVGNFKNSNDY
HYQTLKDNVDLLKLIQLGLTFSDENGNLPKCGTDKYYIWQFNFCDFNPNEDVYANDSIEL
LRQSGIDFKKNIEKGIDAKRFGELLMSSGIVLNDTVYWVTFHSGYDFGYLLKILTCQDLP
DTQAGFFNLINMYFPVVFDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLKENFFSGSMEKYAGVLYGLGVVENGQNVH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttacccaaaagcgattcgattcacattcgagaagtatggagtgacaatctg
gaacaagagttcgatttaatccgagaaatcgtcgatgagtatccgtacattgcaatggat
acggagtttccaggagttgttctccgacctgtcgggaatttcaagaacagcaacgattat
cattaccaaaccctaaaggataacgtggatttgttgaagttaattcagttggggttaaca
ttctctgatgaaaatgggaatttaccaaagtgtggtactgataaatactacatttggcag
tttaatttctgtgattttaatccaaatgaggatgtttatgctaatgactcaattgagttg
ttgaggcagagtggcattgatttcaagaagaatatcgaaaagggtatcgatgcgaagcga
tttggtgagcttttaatgtcttcagggattgtgctaaatgatactgtatattgggttaca
tttcatagtggttatgattttggctacttgttgaaaatcttgacttgtcaggatttgcct
gatactcaagcaggcttctttaacttaatcaacatgtattttcctgtggttttcgatatt
aagcatttgatgaagttctgtaatagtcttcatggtggattgaacaagcttgctgagctt
ttggaggttgagagagttggtgtttgccatcaggccggttcggatagcttgcttacagct
tgtacttttaggaagttgaaagaaaacttctttagtggatcaatggagaagtatgccggt
gtcttgtatggtctaggtgttgttgagaatggacagaatgtccattga
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