Nicotiana tomentosiformis: 104091311
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Entry
104091311 CDS
T05025
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104091311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104091311
Spliceosome [BR:
nto03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104091311
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
104091311
NCBI-ProteinID:
XP_009594918
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All DBs
Position
8:complement(121239158..121247034)
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AA seq
483 aa
AA seq
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MATLADSFLADLDELSDNDADVLDEENLDAEHMEEDGDLADLEALNYDDLDNVSKLQKSR
RYIDIMQKVEDALEKESDVTNRGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKKKTLAGFSTATSQFHVGYIEQTETFQSAPPSLRMRAVRLLAAKST
LAARVDSISGDPTGKTGRTLREEIQKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggacgagttgtcagacaatgatgct
gatgttcttgatgaggagaatcttgatgctgagcatatggaggaagacggagacttggca
gacttagaagcactaaattatgacgatctagataatgtttccaagctgcaaaaatcacgt
cgctacattgacataatgcagaaagttgaagatgcacttgagaaggagtccgatgtcacg
aatagaggtattgttctcgaagatgatccagagtatcagttgatagtagactgtaatgcc
ttatcagttgacattgagaatgaaattgttataatccacaatttcatacgcgacaagtat
cgattgaaattccctgagttagagtcacttgttcatcacccaattgattatgctcgggtt
gttaagaagattggcaatgaaatggatctgactcttgttgacttggaaggattgctaccc
tcagctatcatcatggttgtctctgttacggcatcaactaccagtggcaagccattgcca
gaagatgttttacagaagacagtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttcttgattttgttgagagtcgaatgggatatattgctcccaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcgtca
ttggcaaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaagaagactttagca
gggttctccacagcaacttcccaatttcatgtgggttatattgagcaaacagaaacattt
caaagtgcacctccttccttaaggatgcgagccgttagactgctggcagcaaaatctaca
ttagcggcacgtgtggactcaatcagtggagacccgactggaaaaactggaagaactctt
agggaagagatccagaaaaagatagagaaatggcaagagccacctcctgcaaagcagcca
aagcctcttccagttcctgattctgagcctaagaaaaagagaggtggtcgtcgtctgaga
aagatgaaggaaagatatgctatcacggacatgcggaagctagcaaacaggatgcagttt
ggagtacctgaagaaagctccttaggggatggactaggggagggctacggcatgcttggt
caggctggaagcggcaagttgcgtgtatcagttggtcaaagcaagcttgctgccaaagta
gcaaagaaattcaaggagaagagttatggaagcagtggtgccacatcagggttgacttca
agtttggccttcaccccagtgcaagggatcgagctatcaaatcctcaggcgcttgcaaat
cagcttggcagcggaacgcaaagcacctatttctctgagactggaacgttttctaagatt
aagagaacatga
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