Nicotiana tomentosiformis: 104091319
Help
Entry
104091319 CDS
T05025
Name
(RefSeq) soluble starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00500
Starch and sucrose metabolism
nto01100
Metabolic pathways
nto01110
Biosynthesis of secondary metabolites
Module
nto_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
104091319
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nto01003
]
104091319
Enzymes [BR:
nto01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
104091319
Glycosyltransferases [BR:
nto01003
]
Polysaccharide
Storage polysaccharide
104091319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
CBM_25
DUF3592
DUF3450
Peptidase_M2
Motif
Other DBs
NCBI-GeneID:
104091319
NCBI-ProteinID:
XP_009594929
LinkDB
All DBs
Position
2:complement(83359444..83374883)
Genome browser
AA seq
1243 aa
AA seq
DB search
MDVPLPLHRPLSCSNSVSTERTHLNIKPFLGFVPHGTTCLSVQSSSWRNDGMVAGVSYPF
CANFSRRRQRKISTPRSQGSSPKGFVPRTPSGTSTQRRDQKSNGDKESQSTSSSKESEIS
NPKTMEAKVETSDDGTKQVGKDRKFQEEEDEFNGATKSVSLSPVRGSTQFVESGETGDDD
EGAVDLNKSNRTEESDFQIGSVRREQSEGDYSENTNASSKGSHALGTPLSEILQLDTYGG
YKVDELDEPQKLKENDAGDVEDERPLARELLEMTKPSDVEFTESNEIADVDSSSFLKADS
VEEDEPSAVGTLETEDISLKLRLEMEANLRRQAIERLAEENLLQGIRLFCFPEVVKPDED
VEIFLNRSLSTLNNEHDLLIMGAFNDWRWRSFTTTLTETRLNGDWWSCKIHVPKEAYKID
FVFFNGKDVYDNNDNNDFSITVEGGMQILDFENFLLEEKRREQEKLAKEQAERERLAEEQ
RRIEAEKAALEVDRSQAKEEVAKKREVLQALMAKASKTRDITWYIEPSVFKCEEKVKLYY
NKSSGPLSHAKDLWIHGGYNNWKDGLSVVEKLVKSERIDGDWWYTEVVIPDRALVLDWVF
ADGPPKHAIAYDNNHRQDFHAIVPKHIPEELYWVEEELQIFKALQEERRLREEAMRAKAE
KAARMKAETKERTMKSFLLSQKHIVYTEPLDVQAGSSVTVYYNPANTVLNGKPEIWFRCS
FNRWTHRLGPLPPQKMLPAENGTHVKATVKVPLDAHMMDFVFSEREDGGIFDNKSGMDYH
IPVFGGVAKEPPMHIVHISVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLK
MNQVKDFQFHKSYFWGGTEIKVWFGKVEGVSVYFLEPQNGLFWKGCVYGCNNDGERFGFF
CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLI
GKAMTYADKATTVSPTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPLNDKFIPISYTS
ENVVEGKTAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLL
GSAPDPRIQNDFVNLANQLHSTYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLT
QLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAAGVDYALNRA
LSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKLE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggatgttccattgccactgcacagaccattgagttgcagcaatagtgtctccactgaa
agaacccacctcaacatcaaaccttttcttggttttgtccctcatggaaccacatgtcta
tctgtacaatcttcttcatggaggaacgatggaatggttgctggagtttcatatccattt
tgtgcaaatttctccagaagaagacagagaaaaatttcaactcctaggagtcaaggctct
tcaccaaaggggtttgtgccaaggacgccttcagggacaagcacacaaagaagggatcag
aagagcaatggtgataaagaaagtcaaagtacttcatcatccaaagaatctgaaatttcc
aaccccaaaacgatggaagcaaaagttgaaactagtgatgatggcactaaacaagtggga
aaggaccgcaagtttcaggaggaggaagatgaattcaatggtgccactaaatcagtaagt
ctgtcacctgttcgtggatcaactcaattcgtcgaaagtggagaaactggcgatgatgac
gagggtgctgtagatttaaataaatcaaatagaacggaagagagtgattttcaaattggt
tctgtaagaagagaacaaagtgaaggtgattactccgaaaatactaatgccagtagcaag
ggcagccacgctttgggtacaccactttctgagatattgcagctggatacttatggaggt
tataaagttgatgagttggatgagccacaaaaactgaaagaaaatgatgctggggatgtt
gaagacgagagacccttagcaagagagctgttggaaatgactaagcctagtgatgtggaa
tttactgaaagcaatgagatcgctgacgtagacagtagtagtttcttaaaagcagattca
gttgaagaggatgagccatcagcagtaggaacattagagactgaagatatttctcttaaa
ttaagattggagatggaagcaaatctacgtaggcaggctatagaaaggcttgccgaggaa
aatttgttgcaaggaatcagattattttgtttcccagaggttgtaaaacccgatgaagat
gtcgagatattccttaaccggagtctttccactttgaataatgagcatgatctcttgatt
atgggagcttttaatgactggcgctggagatcttttactacaacactaactgagactcgt
ctcaatggagattggtggtcttgcaagatccacgtccccaaggaagcatacaagatcgat
tttgtgttttttaatggaaaagatgtctacgacaacaatgataataatgatttcagtata
actgtggaaggtggtatgcaaattcttgattttgaaaatttcttgctcgaggagaaacgg
agagaacaggagaaacttgctaaagaacaagctgaaagagaaagactagcagaagaacaa
aggcgaatagaagcagagaaagctgcacttgaagttgatagatcacaggcaaaggaagag
gttgcaaagaaaagggaagtattgcaagcactgatggcaaaagcctcgaagactcgtgat
atcacctggtatatagaaccaagtgtatttaaatgtgaggagaaggtcaagttatactat
aacaaaagttcaggtcctctctcccatgctaaggacttgtggatccatggaggatataac
aactggaaggatggtttgtctgtcgttgaaaagcttgttaaatctgagagaatagatggt
gattggtggtatacagaggttgtcatccctgatcgggcacttgtcttggattgggttttt
gctgatggtccacccaagcatgccattgcatatgataacaatcatcgccaagacttccat
gccattgtccccaagcacattccggaggaattatattgggttgaggaagaacttcagatc
ttcaaggcacttcaggaggagagaaggcttagagaagaggctatgcgtgctaaggctgaa
aaagcagcacgtatgaaagctgaaacaaaggaaaggactatgaaatcatttttattgtct
cagaagcacatagtgtacactgagcctcttgatgtccaagctggaagcagcgtcacagtt
tactataatcccgccaatacagtacttaatggtaaacctgaaatttggttcagatgttca
ttcaatcgttggactcaccgcctgggtccattgccgcctcaaaaaatgttgcctgctgaa
aatggcacccatgtcaaagcaactgtgaaggttccattggatgcacatatgatggatttt
gtattctctgagagagaagatggtggaatttttgacaataaaagtggaatggactatcac
atacctgtgtttggaggagtcgcaaaagaacctccgatgcatatcgttcatatttctgtc
gaaatggcacctattgcaaaggtgggaggccttggtgatgttgttactagtctttcccgt
gcagttcaagatttaaaccataatgtggatatcatcttacctaagtatgactgtttgaag
atgaatcaggtgaaggactttcagtttcacaaaagctacttttggggtgggactgaaata
aaagtatggtttgggaaggtggaaggtgtctccgtctactttttggagcctcaaaacggg
ttattttggaaggggtgtgtatatggttgtaataatgatggtgaaagatttggtttcttt
tgtcacgcggctttggagtttcttctgcaaggtggatttcatccggatatcatccattgc
catgattggtctagtgctcctgttgcgtggctctttaaggaacaatatacacactatggt
ctaagcaagtctcgtattgtcttcacaatacacaatcttgaatttggtgcagatctcatt
gggaaagcaatgacttatgcagacaaagctacaacagtttcaccaacttactcaaaggag
gtgtctggaaaccctgtaattgcacctcacctttacaagttccatggtatagtgaacggg
attgacccagatatttgggacccgttgaacgataagttcattccgatttcatacacctca
gaaaacgttgttgaaggcaaaacagcagccaaggaagctttgcagcaaagacttggactg
aaacaggccgaccttcctttggtaggaataatcacccgcttaactcaccagaaaggaatc
cacctcatcaaacatgctatttggcgcaccctggaacggaatggacaggtggtcttgctt
ggttctgctcctgatcctaggatacaaaacgattttgttaatttggcaaatcaattgcac
tccacatataatgaccgtgcacggctctgtctaacatacgatgagccactttctcacctg
atatatgctggtgctgatttcattctagtcccttcaatatttgagccatgtggactaaca
caacttacggcgatgagatatggttcaattccagttgtgcgtaaaactggaggactttat
gatactgtatttgatgttgaccatgacaaagagagagcacaacagtgtggtcttgaacca
aatggattcagctttgatggagctgatgctgccggagttgattatgctctgaatagagcg
ctgtctgcttggtatgatggtcgggattggttcaactctttatgcaagcaggtcatggaa
caagattggtcttggaaccgacctgctcttgattatttggagctttaccatgctgctaga
aagttagaatag
DBGET
integrated database retrieval system
