Nicotiana tomentosiformis: 104091513
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Entry
104091513 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104091513
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
104091513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
104091513
NCBI-ProteinID:
XP_070051015
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Position
2:complement(3004932..3009587)
Genome browser
AA seq
1131 aa
AA seq
DB search
MSSELKPLSPSEWENLIDDYNHGGVARLLRWTSTNYAAIPLFNLTLSSLLRKDLPHNLKL
QLLIFLEEQQYNNQNDVVSSTFPNRLLETLRSVIQSPNDGVSTSFALKEQFLISSTSIFI
NSVSFPLNSVNSSFITPFESLIELLLTIINRPNHSVDRQTRSIACECLRELEIAFPCLLC
EIGSHLWSLCQSERTHAGQSYVLLLVTVVYNIVKLKPHVSFSNSSSTLVPFTVPRFLVDE
NCKDEVFVGGELSDLSNRELRRVISFLFEWPQNLTPWGLLEFMDKTLPVAAALDLQGSLL
KVQFSGLLYTYDPLLWHAYLVMYLSFMDSFEGQELEIASRLLLLSKESQHHLSFRLLVLY
WLVGLIRLVLKRNVEKRKNVVDMSLSFYPSVFDPLALKSLKLDLLAYCSALMDNEKGVVS
AKGSSEMTKEKLLEDGLVCVSAFKWLPPWSMETSVAIRAIYKFLIGQSHSDNDSISNKIL
VEPTILHTVQRTLIDSLSEYRGLVPVIVGFTDRLLTCHKHRWLGERLLKTFDDHLLPKLK
IDYKLVSYFSILERIAESDKVSSIGLMEILTKFMAFLVEKHGPDTGLRSWGHGSKVLGIC
RTMILHQHSSKLFVGLSRLLSFTCLYFPDLEIRDNARIYLRMLICVPGKKLRDILNSGDQ
LPGISPSTHSSSFFSVQSPRISHDPKKSRSISSCMHLERVVPLLVKQSWSLSLSTLGLDA
KKPSYIEPIKDNVSPSEQSELDKITDITVISEANRHSQPPEPLRVMDSKISQIVEILRKH
FSFIPDLRHMPGFKIKIPCALRFESEPFSRIWGINMLANGVDTLPALYATALKFSSAAPY
GSIPSCHIPFLLGQPPKSFYSFNQTNSLDIIPVENVSETSGDDKSFKAPVLIELEPQDPV
PGLVDVFIETNADNGQIIRGQLHNITVGIEDMFLKAIVPEDTPEDAVCRYYVDLFSALWE
ACGASTSTGRETFVLKGGKGVAAISGTRSVKLLEVPVASLIQAVERSLAPFVVCVTGDPL
TSLVKERGVIRDVEWNEVTLGTSSTDDTISESSIVGGPLYLKYKDDEDEGGGYVQISKKN
LGSIQILIFLPPRFHLLFQMEVSDTSTLVRIRTDHWPCLAYVDDYLEALFC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaactcaaacccttatcgccttcagaatgggaaaatctaatcgacgactac
aaccacggcggcgtagcacggctactccggtggacttccaccaactacgccgccattcct
ctctttaacctcacactttcatcactcctccgcaaagacctccctcacaatctcaaactc
caactcctcatcttcctcgaagaacaacaatacaacaaccaaaacgacgtcgtttcatcc
actttccctaaccgtctcctcgaaactctaagatcagtcatccaatcgccaaacgacggc
gtttcaacttcattcgcgctcaaagaacagttcctcatctcgtccacttcgattttcatc
aattccgttagtttcccgttaaattctgttaattcgagttttattactccgtttgaaagc
ttaattgagcttctgttgactattatcaaccggccgaatcatagcgttgaccgacaaacc
cggtcgatcgcctgtgaatgcttacgcgagttagaaattgcttttccttgtttactttgt
gaaattggatcacatctatggagtttgtgccaaagtgaacgtactcatgctggccaaagc
tatgtattattgttagttactgttgtttataacatcgtgaaattaaaacctcatgtatcg
tttagtaattcttcgagtacgttggttccgtttactgtaccgaggtttttagtagatgaa
aattgtaaagatgaggtttttgtagggggggagttatcagatttgagtaatagggagtta
aggagagtgatctcatttttgtttgaatggccgcaaaatttgactccatggggtctcttg
gagtttatggacaagacattgccagttgctgcagctttagatttgcaggggtctttgttg
aaggttcagttttcagggttgctttatacgtacgatcctttgttatggcatgcttatttg
gtcatgtatttaagctttatggactcgttcgaagggcaagagttggaaatcgcgagtcga
ctcttgttgttatcgaaagaatctcagcatcatttgtctttccggttgctggtgctgtat
tggttagttggattgatacggttggtattgaagaggaatgtggagaaaaggaagaatgtc
gttgatatgagcttgagcttttatccgtcagtgtttgatccgcttgctttgaaatcattg
aagcttgacttgcttgcctattgttctgctttgatggataatgaaaaaggagtagtgagt
gcaaagggaagttcggaaatgactaaggagaagttacttgaagacggccttgtttgtgta
tcagcttttaaatggttgcctccttggagtatggagacttctgtggcaattcgtgctatc
tataagtttttgattgggcagtctcattcagacaatgattctatctccaataaaatccta
gtggagccaacgatcctccacactgtgcagagaacacttatagactctttatctgaatat
agaggattagttcctgtcattgttggttttactgaccgcttattgacatgtcacaagcac
cggtggttgggggaacgcctacttaagacatttgatgaccacttgcttccaaaactcaag
atagattacaaattggtatcttacttctctatattggaaaggattgctgagagtgataaa
gtttcttctattgggttaatggagatccttaccaagttcatggcatttcttgtcgaaaaa
catggtccagatacaggattaaggtcttggggtcacgggagtaaagttcttggaatttgt
cgaactatgatcctgcatcaacatagttccaaattatttgttgggttatctcgtctttta
tcattcacttgtctttatttcccagatctggagattcgtgacaatgccagaatttacctg
cggatgctgatttgtgttcctgggaaaaagctaagagacattctaaacagtggggaccag
cttcctggaatttctccatctactcattccagctctttcttcagtgttcagtctcctaga
atttctcacgaccctaagaaatccaggagtatttcatcctgcatgcatcttgagcgcgtg
gtgccattgttggttaaacaatcttggtctttgtccctgtcaactctgggacttgatgcc
aagaaacctagttatatagaacccatcaaggacaatgtgtccccaagtgagcaaagtgag
cttgacaaaattactgatattacggtgatctctgaagccaataggcacagtcagcctccg
gagccattacgtgttatggattcaaagatttcgcagattgttgaaatcttgaggaagcat
ttttcatttattcccgacttaagacacatgccaggtttcaagattaaaataccttgtgct
ctaaggtttgagtcagagcctttcagtcgcatttggggaatcaatatgctagctaatgga
gttgacacccttcctgccttatatgcaactgcgctcaagttctcttctgctgcgccatac
ggctctattccatcatgccacattccttttcttctaggtcaaccccccaaaagtttctat
tcgtttaaccagacaaattcccttgatattatccctgtggagaatgtatctgaaacttct
ggagatgacaaaagcttcaaagctcctgttctgattgaattggaaccacaggatccagta
cctggtcttgttgatgttttcattgaaacaaatgcggacaatggtcagatcattagagga
cagctgcataacattacagtaggaattgaagatatgtttctcaaagctattgttccagaa
gacacgcctgaagatgcagtatgtcgatattatgtggatctgtttagtgccttgtgggaa
gcatgtggtgcatcaaccagcactgggcgggagacatttgtacttaaaggaggtaaaggg
gttgcagcaatcagtggtactcgctccgtgaagctactggaggttcctgtggcatctttg
atccaagccgtagagcgatccttggcaccttttgttgtatgtgtaaccggtgatcctcta
accagcctcgtgaaggagagaggagttataagggatgttgaatggaatgaggtgactttg
ggtacctcttccactgatgataccatctcagaatctagtatagttggggggcccctttac
ctcaagtacaaggatgatgaagatgagggagggggttatgtccaaattagtaagaaaaac
cttggatcaattcagatcttaatattccttccaccaagatttcatctcctttttcagatg
gaggtttctgatacttctacattagtccgaattagaacggatcactggccatgccttgct
tatgttgatgactatttggaagctttattttgctaa
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