Nicotiana tomentosiformis: 104091714
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Entry
104091714 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104091714
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104091714
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104091714
NCBI-ProteinID:
XP_009595414
LinkDB
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Position
4:108485166..108493896
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AA seq
670 aa
AA seq
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MSYYRRRFRHMIKCLCACAGQTGACCHSGGPGTMSPIGVKLYIQDRHVMMDNGIVQVTLS
NPDGIVTGIRYNGVDNLLEVLNDESNRGYWDVVWNSLDGGRSGVFEVIKGTNFEVITETD
DQVEISFSRPWDPSLQGKLVPLNIDKRFILLRGYSGFYSYAIYEHVGSPEWPAFSLGETR
IAFKLRKDKFHYMAVADNRQRFMPLPDDRLPARCQRLAYAEAVLLNNPVEPELRGEVDDK
YQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHY
AGDDLTPKFAQGEAWKKVFGPVFIYVNSVMQGEDPVALWDDAKIQMQVEVQSWPYCFPAS
EDFPSADQRGNVSGRLLVQDEYISDDYIPANGAYVGLAPPGEAGSWQKECKDYQFWAKAD
SIGYFSINNIRPGDYNLYAWVPGFIGDYLYETPISITPGCSVDVDEIVYQPPRDGPTLWE
IGIPDRTAAEYFVPEPNPRFINKLFINHPDRFRQYGLWERYSELYPKDDLVYVTGESDYS
KDWFFAQVPRRKEDGTYQGTTWQIRFKLDSVNQVGTYKLRIAIASATLAEVQVRVNDPNT
NRPLFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRNQSPFQGIMY
DYIRLEAPPN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagttattatcggcgtcgtttcagacacatgataaaatgcttatgcgcgtgcgctgga
caaacaggagcttgttgtcatagtggaggtcctggaacaatgtccccaattggagtgaag
ttgtacattcaggatcgtcatgtgatgatggataatggcatagtccaagtcacgttatca
aatccggacggaattgtcactggaatacgctataatggcgtagataatctacttgaagtc
cttaatgatgaatccaatagagggtactgggacgttgtctggaattctctagatggtgga
agaagtggagtatttgaagtgatcaagggtacaaattttgaggttataacagagacagac
gatcaggttgagatatcattttcccgaccatgggatccctccctccaaggcaaacttgtt
ccgctgaatattgacaaaaggtttattttgctccgtggctactctggtttctactcctat
gccatttatgagcatgttggttcacctgagtggcctgccttcagccttggtgaaactaga
atagcattcaagctccggaaagataagtttcactacatggctgttgcagacaataggcaa
agattcatgcctctaccagatgaccgattgcctgcaagatgccaacgccttgcctatgca
gaagcagtcctacttaataatcccgtggagcctgagttaagaggagaggtcgatgacaaa
taccagtactcatgtgataataaagataacaaggttcacggctggatatctatggatcca
cctgtgggattctggcaaattactccgagcgatgaatttcgatctggtggtcctgtcaaa
cagaacctcacatcccatgtcggtccaactaccctagctatgtttctaagctctcattac
gctggggatgatctaacaccaaaatttgctcaaggagaagcctggaagaaagtttttggc
cccgtttttatatatgttaattctgttatgcaaggggaagatcctgttgctctatgggat
gatgccaagatacagatgcaggttgaagttcaaagctggccttactgttttccagcatca
gaagattttccatcagcagatcaaaggggcaatgttagtggtagacttttggttcaagac
gagtacattagtgatgattatataccagcaaatggcgcttatgttgggcttgctccacca
ggagaagctggttcctggcaaaaagaatgcaaggactatcaattttgggctaaagcggac
agtattggatacttctccataaacaatatacgtcctggggactacaatctttatgcatgg
gtccctggattcattggggactatttatatgagactcccatttccataactccaggttgt
agtgttgatgtggacgaaatcgtatatcagcctccaagggatggccccacattatgggaa
ataggcattcctgatcgtacggctgcagaatattttgtccctgaacccaacccaagattt
atcaacaagcttttcatcaatcatcccgatagattcaggcaatatggattgtgggaaaga
tactccgagctatatccaaaagatgaccttgtgtatgtaactggagaaagtgactatagt
aaagactggttttttgctcaggttccaaggagaaaagaggacggtacatatcaaggaacc
acgtggcaaatcagatttaaacttgattcggtcaatcaagtaggaacttataaattgcgc
attgcaattgcatctgcaactttagctgaagtgcaggttcgagtgaatgatccgaacaca
aaccggcctctattttcgacgggattgattggaagagataactcaattgctaggcatgga
attcatggcctctattggttgtacaatatagacatacagggaaatctgctagtgcaggga
gataacactatttacttaggccaaccaagaaaccaaagtcctttccaggggattatgtat
gactatattcgtcttgaagcgccaccaaactaa
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