Nicotiana tomentosiformis: 104091911
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Entry
104091911 CDS
T05025
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104091911
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104091911
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF3737
Motif
Other DBs
NCBI-GeneID:
104091911
NCBI-ProteinID:
XP_009595646
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Position
8:complement(103776560..103782635)
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AA seq
406 aa
AA seq
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MDRAFIFVICITPFILDKSLAAIFDVTSYGAVGDGMHDDTKVTQIISIAFKQAWTATCSS
KSRNPSMLIPSEKSFLIRPITFQGPCKSSNIHLQLSGSIVAPEDPKEWRGCENVSWIYFT
GVFGLFINGSGTINGNGQRWWKIPSGIRVNGTCTKPTAVHFNYCNGLQLSGIKLVNSSRN
HISLTYSKGVTISNIHISAPKYSRNTDGIDISNSSQLHIQDSTIQTGDDCIAINTGCVDI
HISGISCGPGHGISVGSLGPDNTYAYVDNVYVTNCNLVGTQNGVRIKTWQGGSGYARSIH
FEDIHLKNVENPIIIDQNYCNGDHSCQPQESAVKVSYITYKNIHGSTSSKAAINLNCSNS
TACTNIDMENINITPVVSGQKVFAICNNAKGKASSTSPPVPCLDKY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagctttcatttttgtgatttgtattactccatttattcttgacaaaagtctt
gctgctatttttgatgtaacaagttatggcgccgttggagatggaatgcacgacgacact
aaagtaacacaaataatttcaattgcattcaaacaagcttggacagctacttgtagcagt
aaaagtagaaatccgtcaatgcttataccaagtgaaaagtcatttttaatacggcctatt
acattccaaggaccttgcaagtcctccaatattcatctacaattatcaggatcaattgta
gcaccagaggatccaaaggaatggagaggttgtgaaaatgttagttggatttattttaca
ggtgtttttggtctcttcatcaatggttctggtactatcaatggcaatggccaacgctgg
tggaaaattcctagtggtatcagggtgaatggaacttgcactaaaccaactgctgtccac
ttcaattattgtaacggccttcaattgagtggaattaagctagtgaatagttcgagaaac
catataagcctgacttacagcaaaggagtaaccatctcaaatattcatataagtgcacca
aaatatagtcgcaatactgatggtattgatatctctaactctagccaacttcacattcaa
gactccactattcagacaggtgatgactgcattgccatcaatactgggtgcgttgatatt
catatttctggtatttcatgtggaccagggcatggtataagtgtgggtagcttaggtcca
gataacacatatgcgtatgtggacaacgtctatgtaacaaattgtaaccttgtgggaact
cagaatggtgttagaattaagacatggcagggtggttctggatatgctaggtctatacat
tttgaagatattcacctcaaaaatgtagaaaaccccatcattattgatcagaattattgc
aatggagaccattcatgtcaacctcaggaaagcgcagtgaaagtgagctatataacatac
aagaatatacatggaagtacaagcagcaaagcagcaataaatttgaactgtagcaatagc
acagcttgcaccaacattgatatggagaatatcaacataactccagttgtctctggacaa
aaggtttttgctatttgcaataatgccaaaggaaaagcctcttcaacttcacctcctgta
ccttgcttggataaatattag
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