KEGG   Nicotiana tomentosiformis: 104091926
Entry
104091926         CDS       T05025                                 
Name
(RefSeq) single-strand DNA endonuclease 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nto03400]
    104091926
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     104091926
SSDB
Motif
Pfam: Chromo_SEND1 XPG_I XPG_N Chromo_2 XPG_I_2
Other DBs
NCBI-GeneID: 104091926
NCBI-ProteinID: XP_009595666
LinkDB
Position
3:82879654..82889992
AA seq 598 aa
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAIKDKLYLRGLFHR
LRALIALNCSLIFVTDGAIPAIKSSTYRRRLNPGNVLTQDEAIKPSSIRRNAGSEFSRMI
KEAKVLGNALGIPCLDGIEEAEAQCAVLNYESFCDGCFTSDSDVFLFGARTVYRDICLGE
GGYLLCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGLGRESACQIVKSIGDSAVLQ
WIASEGFSFVKKQKGSKKKIEDDKCNGRENAAEYKNPNGSKCPSQMKSQTLQVLNAYLKP
KCHSAESDAVQRILVLYPYIRSQLQQICTEFLDWPPEKTDEYILPKIAERELRRFANLRS
TASQLGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVQRACP
ERILEFQERRVQGKKRNNTRSRRPRLEKMPPLGQIDQKLQDLLLEVDRESSAADGATVLF
GSASEDDESIAQIHIDSSIQTHSTWNSYSVKKGFASGSPICQEDDILPALSKAEVIDLTS
PPPVRHGSGKSKHQEEDNVECIDVIELSDSENDMFSPEHIRRARELRMFIAGIKDKFY
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgggcgtaaagaacctttgggacatattagaatcttgcaagaaaactcttcctcttcat
catctccagaacaagagggtatgtatagatctttcttgctggatagttcaacttcaaaat
gtcaacaaatctcactgtgccatcaaagacaagctttatctcaggggtctcttccaccgc
cttagagctctcattgctttgaattgtagcctcatctttgtcaccgatggagccattcct
gctatcaaatcatctacttatagaaggcgactaaatcctggaaatgtgctcactcaagat
gaggcgattaaaccgtcatcaatacgaagaaacgcaggatctgaattttcacgcatgata
aaggaggctaaagttcttggaaatgcacttggaattccttgcttagatgggattgaggag
gctgaagctcaatgcgcagtattaaactatgaatcattctgtgatggatgtttcacatca
gattctgatgtcttcctatttggggcaaggacagtgtatagagatatttgccttggggaa
ggtgggtatcttctttgctatgaaatggatgatattgagagaaagcttggacttggaagg
aactccttgataacgctggctgttattcttggtggtgattactctgaaggagtttatggg
cttggtcgggagtcagcttgtcagattgttaaatcaattggtgatagtgctgttcttcaa
tggattgcatcagaaggattttccttcgtaaagaagcaaaaaggttctaagaaaaagatt
gaagatgacaaatgcaatggtagagaaaatgctgcagagtataaaaatcctaatggaagc
aaatgcccttcacaaatgaaaagtcagacgttgcaagtattaaatgcatatctgaaacca
aagtgccattcagcggaatctgatgccgtacaacggattcttgtgttgtatccatatatc
cgcagccagcttcagcaaatatgcactgaatttcttgattggcctcctgagaagacagac
gagtatatccttcctaagattgctgaaagggaactgcggagattcgccaacttgcggtcc
actgcatcacaattgggagtccagcttccattaaatgagatgccaataaagtgtccttta
tctcgaattataaagccgaggaaagttcaaggagtagattgctttgaggtatcttgggaa
gaaatggatggacttgaaacctctatagtaccagctgatctcgttcagagggcttgtccg
gaaaggattttggagttccaggaaagacgagttcaaggaaagaaaagaaataatactagg
tcaagacgaccgagactagagaaaatgccgccattgggtcagattgatcaaaaactccaa
gacctcttgcttgaggttgatcgagaaagctcagctgctgatggtgcaactgttttgttt
ggatcagcatcagaagatgatgaaagcattgctcaaattcatatagactcaagcatacag
acgcatagtacgtggaatagctacagtgtcaagaagggttttgcttctgggagccccatt
tgccaagaggacgacattttaccagctttgtctaaagctgaagtaattgatctcacaagt
cctccaccagtgcggcatggttctgggaaatccaaacaccaggaggaggacaacgttgaa
tgcattgatgtaattgagcttagtgattcagaaaatgatatgttttctcctgaacatata
agaagagccagagaactgagaatgttcattgcgggaattaaggacaagttttactga

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