Nicotiana tomentosiformis: 104091926
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Entry
104091926 CDS
T05025
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104091926
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104091926
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
104091926
NCBI-ProteinID:
XP_009595666
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All DBs
Position
3:82879654..82889992
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AA seq
598 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAIKDKLYLRGLFHR
LRALIALNCSLIFVTDGAIPAIKSSTYRRRLNPGNVLTQDEAIKPSSIRRNAGSEFSRMI
KEAKVLGNALGIPCLDGIEEAEAQCAVLNYESFCDGCFTSDSDVFLFGARTVYRDICLGE
GGYLLCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGLGRESACQIVKSIGDSAVLQ
WIASEGFSFVKKQKGSKKKIEDDKCNGRENAAEYKNPNGSKCPSQMKSQTLQVLNAYLKP
KCHSAESDAVQRILVLYPYIRSQLQQICTEFLDWPPEKTDEYILPKIAERELRRFANLRS
TASQLGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVQRACP
ERILEFQERRVQGKKRNNTRSRRPRLEKMPPLGQIDQKLQDLLLEVDRESSAADGATVLF
GSASEDDESIAQIHIDSSIQTHSTWNSYSVKKGFASGSPICQEDDILPALSKAEVIDLTS
PPPVRHGSGKSKHQEEDNVECIDVIELSDSENDMFSPEHIRRARELRMFIAGIKDKFY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaaagaacctttgggacatattagaatcttgcaagaaaactcttcctcttcat
catctccagaacaagagggtatgtatagatctttcttgctggatagttcaacttcaaaat
gtcaacaaatctcactgtgccatcaaagacaagctttatctcaggggtctcttccaccgc
cttagagctctcattgctttgaattgtagcctcatctttgtcaccgatggagccattcct
gctatcaaatcatctacttatagaaggcgactaaatcctggaaatgtgctcactcaagat
gaggcgattaaaccgtcatcaatacgaagaaacgcaggatctgaattttcacgcatgata
aaggaggctaaagttcttggaaatgcacttggaattccttgcttagatgggattgaggag
gctgaagctcaatgcgcagtattaaactatgaatcattctgtgatggatgtttcacatca
gattctgatgtcttcctatttggggcaaggacagtgtatagagatatttgccttggggaa
ggtgggtatcttctttgctatgaaatggatgatattgagagaaagcttggacttggaagg
aactccttgataacgctggctgttattcttggtggtgattactctgaaggagtttatggg
cttggtcgggagtcagcttgtcagattgttaaatcaattggtgatagtgctgttcttcaa
tggattgcatcagaaggattttccttcgtaaagaagcaaaaaggttctaagaaaaagatt
gaagatgacaaatgcaatggtagagaaaatgctgcagagtataaaaatcctaatggaagc
aaatgcccttcacaaatgaaaagtcagacgttgcaagtattaaatgcatatctgaaacca
aagtgccattcagcggaatctgatgccgtacaacggattcttgtgttgtatccatatatc
cgcagccagcttcagcaaatatgcactgaatttcttgattggcctcctgagaagacagac
gagtatatccttcctaagattgctgaaagggaactgcggagattcgccaacttgcggtcc
actgcatcacaattgggagtccagcttccattaaatgagatgccaataaagtgtccttta
tctcgaattataaagccgaggaaagttcaaggagtagattgctttgaggtatcttgggaa
gaaatggatggacttgaaacctctatagtaccagctgatctcgttcagagggcttgtccg
gaaaggattttggagttccaggaaagacgagttcaaggaaagaaaagaaataatactagg
tcaagacgaccgagactagagaaaatgccgccattgggtcagattgatcaaaaactccaa
gacctcttgcttgaggttgatcgagaaagctcagctgctgatggtgcaactgttttgttt
ggatcagcatcagaagatgatgaaagcattgctcaaattcatatagactcaagcatacag
acgcatagtacgtggaatagctacagtgtcaagaagggttttgcttctgggagccccatt
tgccaagaggacgacattttaccagctttgtctaaagctgaagtaattgatctcacaagt
cctccaccagtgcggcatggttctgggaaatccaaacaccaggaggaggacaacgttgaa
tgcattgatgtaattgagcttagtgattcagaaaatgatatgttttctcctgaacatata
agaagagccagagaactgagaatgttcattgcgggaattaaggacaagttttactga
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