Nicotiana tomentosiformis: 104091966
Help
Entry
104091966 CDS
T05025
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104091966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104091966
03036 Chromosome and associated proteins [BR:
nto03036
]
104091966
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104091966
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104091966
PBAF complex
104091966
GBAF(ncBAF) complex
104091966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
104091966
NCBI-ProteinID:
XP_009595713
LinkDB
All DBs
Position
3:106944013..106946728
Genome browser
AA seq
531 aa
AA seq
DB search
MNNNNTVRNVGIGNSGPMQIPQSMPMNHNQPAPHLFSQSHVQRASQFPGHFQLSEPQSQR
SHAQFQGQAQAFSHFITSGVNTNVGVSSPATSTPNTATTGGTRKVLQRPTSRAGGSSGHG
QATASPLKTMELTPAVRRKKRKVSDKCIPDKVAANLPESVLYSQLLELEARVDATLCRKK
IDMLESLKDPPHVQKTLRIYVFNTFTNQKPPATPESKTAEPPSWSIKIFGRILGDGPDRP
ASKMEQKSGVSYPKFSSFFKKITVYLDQSLYPDNHVILWDSSRSPVHHDGFEIKRKGDKE
FTAIIRLEMNYMPEKFKLSPALQEVLGIEVETRARVLAALWYYVKTRKLQISDDTSSFTC
DPPLRKVFGEEKLKFSLVSQKINPHLTAPQPIHLEHRIKLSGSSPAGNACYDVLVDVPFT
LQKEMSTFLSNLEKNKEIDACDEVISTAIKKIHEHQRRRAFFLGFSQSPADFINALVASQ
ARDLKLVSGDSGRDAEMERRSEFYNQSWTEDAVIRYLNRKHASGTDHSASK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacaacacagttaggaatgttggtataggaaattcagggccaatgcaaata
cctcaatctatgcccatgaaccataatcaaccagcgccacatctattctctcagtcacac
gtacaacgtgcgtcacagttccctggccattttcaattgtccgaaccacaatctcaacgt
tctcatgctcaattccaaggccaagctcaggcctttagccatttcatcacttcaggggtt
aacaccaatgttggtgtctcatcccctgctacttccacacctaacacagctacgactggt
ggtactagaaaagtgctccagagaccgacttctcgtgctggtggttcctctggtcatggc
caagcaactgcttcacctttaaagactatggaattaacccctgctgtgcgtagaaaaaag
cgtaaagtttctgataagtgtataccagataaagtggctgcgaatttgcccgagtctgtg
ctttactctcagttgcttgaactcgaggctcgtgtagatgctactctttgtagaaagaag
attgacatgttggaatcccttaaggatcctccgcatgtccaaaagaccctcaggatttat
gtattcaacactttcacaaatcagaaaccaccagctactcccgagagcaaaactgctgag
ccaccttcttggtctattaagattttcgggaggatcttgggggatgggccggatcgtcct
gcgtctaaaatggagcagaaatctggtgtttcttaccctaagttttcatctttcttcaag
aaaattactgtttacttggatcagagtctatatcctgataaccatgtaatcttgtgggat
agttctcgatcaccagtgcatcatgatggttttgagattaagagaaaaggggataaggag
tttacagcaatcatcagattggaaatgaattatatgcctgagaaatttaaactttcgcca
gctttgcaagaggttcttggtattgaggttgagactcgagcaagagttttagctgctctc
tggtactatgtaaaaactaggaagctacagatatccgatgacacctcctcattcacatgt
gatccacctctaaggaaagtttttggagaggaaaagttaaaattttccctggtttctcaa
aagattaatccacatctgactgcccctcaacctattcatttggagcacaggattaagcta
tctggaagtagccctgctgggaacgcttgttatgatgtactggttgatgttcccttcaca
ttgcagaaggaaatgtccactttcttatctaatttagagaagaacaaggagatcgatgca
tgtgatgaagttatttctactgctataaagaaaatccatgaacatcaaagaaggcgagct
ttttttcttggatttagtcagtcacctgccgattttattaatgcattagttgcgtctcaa
gccagagatcttaagcttgtttctggagattctggccgtgatgcagaaatggagcggcgt
tctgaattctacaatcagtcttggactgaagatgccgtcatccgctacctgaaccgcaag
catgcttctggtactgaccattctgcaagcaaatag
DBGET
integrated database retrieval system
