Nicotiana tomentosiformis: 104092013
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Entry
104092013 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104092013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104092013
DNA repair and recombination proteins [BR:
nto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104092013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
OmpH
SWI2_SNF2
LUC7
ArlS_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
104092013
NCBI-ProteinID:
XP_070051692
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All DBs
Position
2:complement(74738362..74748137)
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AA seq
908 aa
AA seq
DB search
MNLLNCKFNNTLLTNHLPPRHTSLYNPRATRFSVRFSSESTHRVKLAESLQSETLKLLEW
PAVCRQLSAFTSTSMGFAAAQSALIPVGKTPEESGKLLSQTSAAVAVPRPLDFSGIEDVS
PIVNASIAGGVLSIRELCSVKRTLGAARLLLQQLEEIASLSDFSDRYSPLKEILHNCDFL
VELEQKIEFCIDCSFSAILDRASEDLEIIRSERKRNMGNLESLLKQLSTQVFQGGGFDRP
LVTKRRSRLCVAVRASHRSLLPNAVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSERIE
EQTILSLLTSEIAESNMKIKHLLDRILEIDLAFARAAHAQWIGGACPALSSRNCNNSQSE
LLSIDVEGIRHPLLLESSLRNLSTDVFPRSPDLDQGNGVMNFETKSSAHFPVPIDIKVGH
GTKVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNQPRLPWFDLILADIGDQQSLE
QSLSTFSGHISRLREILEVASRESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVI
TTHYADLTRLKEKDNRFETAATEFSLETLQPTYRILWGSKGESNALNIAKSMGFDERIID
RAVLWVNKLTPDKQQEQKGLLYRSLIEESDRLEYQAMEAASLHSDIMNIYNEINKEAQDL
EGREEAIKAKETHEIQQEVRTVKNEIHTIVEKFESQLRNASADEINPLVKKAESAIASIV
EAHQPSKDSLFREIGQSLYTPQIGEQVYVKAFGNKLATVVEEPGDDDSILVQYGKIRVRV
GKRSVRPIPPDASSGAAVLKTQVQRIKSLRDLGSLAEAGKNQQDSYGPVLQTSKNTIDLR
GLRVEDASHQLNMAIDSRAPNSVLFVIHGMGTGVVKESAHKLLRDHPRVVKFEQESPMNY
GCTVAYIK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttaaactgcaaattcaacaacactctcctcaccaatcatcttcctccacgt
catacctcgctctacaaccctcgtgcaactcggttctccgtccgcttctcatccgagtca
actcacagagtcaaactcgccgagtcactccaatccgagaccctgaagcttctagaatgg
cccgccgtctgtcgccagctctccgccttcacttccacatccatgggcttcgctgccgca
caatctgctctgattccggtgggtaaaactcctgaagagagcgggaaactcctctctcag
acctccgccgccgtggcagttcctcggccgttggatttctccggaattgaggatgtttcc
cctattgttaatgcttccattgccggcggagtactctcaattcgtgagctttgctctgtg
aaacggaccttgggagcggcgaggcttttgctccaacagttggaggaaattgcttcgctg
agtgatttttctgacaggtactctcctctgaaggaaattcttcacaattgtgattttctt
gtggaattggagcaaaaaatagaattctgtattgattgcagcttttcagcaatccttgac
agagctagtgaagatttggaaattataaggtctgagagaaaacggaacatgggaaatcta
gaatcattgttgaagcaattatcaactcaagtttttcagggtgggggatttgacagacct
ttagtaaccaagcgccgttcaagactgtgtgttgctgtcagagcttcccatagatctttg
cttcctaatgccgtaatcctagatacgagcagtagtggatctacatatttcatggaacct
aaagaggcagttgagttgaacaacatggaagttaagctttctagttctgagaggattgag
gagcaaacaattttgagtttgcttacatcggaaatagctgaatctaatatgaaaataaaa
cacttattagatagaatattggaaattgatcttgcatttgcaagagctgctcatgctcaa
tggataggtggtgcctgtccagctttaagttcaagaaattgtaacaattcccaatctgaa
cttttatctatagatgtagaagggatacggcatccattgcttcttgagtcctctttgaga
aacttgtccactgatgtgttcccaaggtcgcctgatttggatcagggaaatggtgtcatg
aattttgaaacaaaatctagtgcacatttccctgtgcccatcgatattaaagttggtcat
ggaacaaaggttgttgtcatctcgggccctaatactggagggaaaacggcttcaatgaag
actctaggactggcttctatgatgttgaaagccggtatgtatttgcctgcccaaaatcaa
ccacggcttccatggtttgatctcattctggcagacataggagaccagcagtctctggaa
caaagtctgtcaacctttagtgggcacatttcacggcttcgtgagattctggaagtcgct
tctagagaatctttagttcttattgatgaaatcggaagtgggaccgatccttcagaaggt
gtagcactttcagaaagcattctgcaatatctcaaggacagggttaatttagctgttata
actacccactatgcagatttaactcgcttaaaagaaaaggacaatcggtttgaaactgca
gcaacagagttttccttggagactctacagcctacctatcggattctttggggaagcaag
ggagaatcgaatgccttaaatattgcaaaatcaatgggctttgatgaaagaataattgac
cgagcagtattatgggtgaacaaattgacaccggacaagcagcaggagcagaagggatta
ctttatcgttcactaattgaagaaagtgacagactagaatatcaagcaatggaagctgct
tctcttcattcagatattatgaacatttataatgagatcaacaaggaagcacaagatcta
gagggacgtgaagaagccatcaaagcaaaggaaacgcatgaaatccaacaggaagtgagg
actgtgaaaaatgagatccacactatagtagagaagtttgagagccaactcagaaatgca
agtgctgacgagattaatccacttgtgaaaaaagctgaatctgctattgcatcgatagtt
gaagctcatcagcctagtaaagattctctattcagagaaataggccagagcctttacaca
cctcagatcggagaacaagtatatgtgaaggcctttggaaataagttagccactgtagtt
gaggaacctggggatgatgacagtatccttgttcaatatggaaaaatcagagtccgcgtg
ggcaaacgtagtgtaagacccattccccctgatgcttcttccggtgcagctgtcctgaaa
acccaggtacagcggatcaagagtcttagggaccttggaagtcttgctgaagcaggcaaa
aatcaacaggattcttatggccctgtgctgcagacatctaaaaacaccatagacttgcgt
ggcctgagagtggaggatgcttcacaccagctcaacatggctattgactcaagagcgcct
aattctgttctttttgttattcatgggatgggcactggggttgtaaaagaatctgcacat
aaattactaagagatcatcctcgtgttgttaagtttgaacaggaaagtcctatgaattat
ggttgtacagttgcttatatcaaatga
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