Nicotiana tomentosiformis: 104092275
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Entry
104092275 CDS
T05025
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104092275
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104092275
REST complex
104092275
Heterochromatin formation proteins
Other heterochromatin formation proteins
104092275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
104092275
NCBI-ProteinID:
XP_009596118
LinkDB
All DBs
Position
10:complement(50544383..50554946)
Genome browser
AA seq
1354 aa
AA seq
DB search
MSSQLKRPIVVSSPAEPSGQSPMMGGSSANKLTTNDALSYLKAVKEIFQDRRDKYDEFLE
VMKDFKAQRIDTSGVIARVKELFKGHQSLIMGFNTFLPKGYEITNPEDEPPVKKPVEFEE
AISFVNKIKTRFQGDDFVYKSFLDILNMYRKENKSIAEVYNEVSYLFRGHPDLLEEFTHF
LPDAMAAARARQAQTHRAPILRYDAKSSSMTTTRHMHVEKKATSHVDRPDPEYEETTMKT
ERERRDPQYEDRELDRKSVHRDSAVDQFEHSMQDHGFAYCERIKERLQDIGDRNQFFKCL
HIYSKEIVTRPQLQSLVSSLLVKHPDLMDGFDEFISHCDRTDGYLAAILSKTRSSWNDEH
VPKSDKVEDRDKERDCEWEDRNRVRETRERDRPDRGVAYGSKDLQGQKMSLYPSKDKYAA
KPIHELDLSNCESCSPSYRLLPKNYPIPLASQRTEIGADVLNDLWVSVTSGSEDYSFKHM
RKNQYEESLFRCEDDRFELDMLLESVNATTRRVEELLNKINDNTIASESHIRIEEHFTAL
NLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRSDFNKVWAEIYAKN
YHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISENKCKEDDVLLSVAAGNGQPIIPHLEF
EYLDSDIHEDLYQIIKYSCSEVCTREQLDKVMKIWTTFLEPIFGVPRQTQGAVDGGDVKA
KNQNAKGNTAIDGERAGTPASDSGMNCRQSSSRNGDEEPPSQHSISSRVRIADGENGFKD
DKSPDATGVTLKIVTSRTLLQHGKAAADPNMADAASGLSREAFGADQLVLSNGTVVEESH
GRVCRETASGHGAGTSRPSSSSIKCELEIKSSNDSKDGGFVDPKAEGVKVEKCLEESIGK
CKLEREEGELTPNGDFEDNFTPSNEGGPNVSHSLKGSSSSKLYQSGHREEVVRGGERGCE
NDADDEREASAHGTSEDSENASENCDVSGSESANGEGSHEEEREEDGDNDENDNKAESEG
EVEGTADVHDAEGDGAVMPFSERLQHTSRPLTKQVPSIFHDREKESRIFYGNDSFYVLFR
LHQTLYERLQKAKLHSSSSEHRWRVSNAINPTESYARFMSALYNLLDGSSDNAKFEDDCR
AIIGAQSYLLFTLDKLIYKIVKQLQTIATDELESKLLQLYAYETSRKSSTFSDVVYHENV
RVLLNEESIYRIACSSTPTSLSIQLMDYVHDKPEMSAVSMDPNFAAYLSNELLSVIPQKK
ENPGVFLTRNKRKYGVGDETFPGEAMEGIQIINGLECKIACSSSKVSYVLDTEDFLIRSR
KRRRTLKDKFSSNGHSKSLNGSSKVKRFRRLLFS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaactcaaacgccccattgttgtctcttctcctgctgaaccttcagggcaa
tccccaatgatgggtggcagcagtgcgaataagctaacaacaaacgacgccctttcttat
ctaaaggcagtgaaggaaatctttcaggacagaagggacaaatatgatgagtttcttgaa
gtcatgaaagatttcaaggctcaaagaattgacacttctggtgtcatagcgagggtgaag
gaattattcaaagggcatcaaagcctaattatggggttcaatacatttttgcccaaggga
tatgagatcaccaatcccgaggacgaacctccagtgaaaaagccagttgaatttgaagaa
gcaatcagttttgtaaacaagataaagactagatttcaaggtgatgatttcgtatataaa
tcatttctcgatattttaaatatgtatagaaaggaaaacaagtccattgcagaagtttat
aatgaggtctcctaccttttccgtggccatcctgatttgcttgaagagttcacccatttt
ttacctgatgccatggccgcagcccgagctcgtcaggctcaaactcatagggcccctatc
ctgcgttatgatgcgaaaagctcttcgatgaccacgacaaggcacatgcacgtcgagaag
aaggctacttcacatgtcgatcggcctgatccagaatatgaagaaacaacgatgaaaact
gaaagggaaagaagggatccacaatatgaggatagagagctggacagaaaatctgttcat
agagattctgctgttgaccagtttgaacacagtatgcaggaccatggttttgcttactgt
gagcggattaaagaaagattacaggatattggagatcgaaatcagttttttaagtgcctt
catatctatagcaaggaaatagttacaagaccacaattacaatccctggttagcagctta
ctcgtgaaacatccagatctcatggacggatttgatgaatttatttctcattgtgatagg
acagatggttatcttgctgctattctgagcaaaacacgatcctcatggaacgatgaacac
gttcccaagtcggataaagtagaagacagggacaaagaacgagattgcgagtgggaagac
aggaatagagtccgcgaaacaagagaaagagatagacctgacagaggcgtcgcctatgga
agtaaagatctacaagggcagaagatgtctttgtacccaagcaaggataaatacgcagca
aagcctatacatgaacttgatctctccaactgtgaaagttgctcaccgagttatcggctt
cttccaaagaattatccaattcctttagcgagtcagcgaaccgagattggtgctgatgta
ctaaatgatctctgggtatcggtgacatcaggaagtgaggattactcttttaaacatatg
cgcaaaaaccagtatgaagaaagcttgttccgatgtgaagatgacaggtttgagctggac
atgcttttagaatctgtcaatgcgacaacaagacgtgttgaagaattgctcaacaagatc
aatgataatactattgccagtgaaagtcatatccgtattgaagaacattttactgctctg
aatctaaggtgcattgaacgtctctacggtgaccacgggcttgatgttatggatgtgtta
aggaagaatgcaccacttgcccttccagttatactcactcgcttgaagcagaaacaagag
gagtgggcaaggtgtcgttctgattttaataaagtttgggctgaaatttatgctaagaac
tatcacaaatcactggatcatcgtagcttttatttcaagcagcaggacacaaaaagcctg
agcacaaaagcactgctggctgagatcaaagaaatcagtgaaaataagtgcaaagaagat
gatgtgcttctctctgttgctgctggaaatgggcaaccaattatccctcatctggagttc
gagtatcttgattctgacatccatgaagacctttatcaaatcattaagtattcatgtagt
gaagtttgtacaagagaacagttggataaagtcatgaagatttggaccaccttcctggaa
ccaatatttggtgttcctcgtcaaactcagggtgcagtggatggtggagatgtaaaggct
aaaaatcaaaatgctaaaggtaacacagcaattgatggggaaagggctggtacccctgct
agtgactcaggcatgaattgcagacaaagcagttccaggaatggagatgaagagcctcca
tctcagcattcaatttcttccagagttcggatcgcagatggcgaaaatgggtttaaggat
gataaatctcctgatgcaactggtgtgacgctgaaaatcgtcacttcaaggaccctcctt
cagcatggaaaggcagccgctgatcccaacatggcggatgcagcatctggtctcagcaga
gaggcttttggtgctgaccagctagtgctttcaaacggcacggttgtggaggaaagccat
ggaagagtctgtagagaaactgcttcagggcatggtgcaggtacttccagacctagtagt
tcctcaatcaaatgtgaacttgagattaaatcttctaatgactcaaaggatggagggttt
gtggacccaaaagcagaaggtgtcaaggttgagaaatgtcttgaagaatccataggaaaa
tgtaaacttgagagagaagagggggaattaactccaaatggtgattttgaggataatttt
acaccatcaaatgaaggtggtccaaatgtatcacatagtttaaagggaagttcaagtagt
aagctgtaccaaagtgggcatagagaagaagtagttcgtggtggagagagaggatgtgag
aatgatgctgatgatgaaagggaagcaagtgctcacgggacatcagaggatagtgagaat
gcttctgaaaattgtgatgtttcaggtagtgagtctgctaatggagaaggttctcacgaa
gaagagcgtgaagaagatggggacaatgatgagaatgataacaaggcagagagtgaagga
gaggtggaaggaactgctgatgtccatgatgctgaaggagatggtgctgttatgccattt
tcagaacgtcttcaacatacatccaggcctctcactaagcaagttccttctatatttcat
gacagggagaaggaatcacgtatattttatggaaatgattcattttatgtgcttttcaga
cttcaccagacgttgtatgaaagactacagaaagcaaaattgcattcttcatcatctgaa
cacagatggagagtctcaaatgctataaaccccactgaatcatatgccagattcatgagt
gcactttataacctgctggatggttcctctgacaatgcaaagttcgaggatgactgccga
gctattattggagctcagtcatatcttctcttcaccttagacaaactgatatacaaaatt
gtcaaacagctacagacaattgcaactgatgagttggaaagtaaacttctccaactgtat
gcgtatgaaacctcaagaaaatctagcacattttcggatgtagtttaccatgaaaatgtg
cgtgttcttcttaatgaagagagcatatacagaatagcatgttcatctacaccaacaagt
ctatccatacaactcatggactatgttcatgataagcctgagatgtctgcggtgtcaatg
gacccgaattttgcagcttatttgagcaatgaactcctctctgttattcctcagaagaag
gagaaccctggggtgttcttgacaagaaacaagcggaagtatggagttggagatgagact
tttcctggtgaagctatggaaggaattcaaattattaatggtctagaatgtaagatagca
tgcagttcatcaaaggtctcttacgttttagacactgaagatttcttgatccggtcaaga
aaaaggcggagaacattgaaggacaaattttcatccaatggccactcgaagtctttgaat
ggttctagtaaagtaaaacgtttccgcagattactcttcagttga
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