Nicotiana tomentosiformis: 104092518
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Entry
104092518 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104092518
Enzymes [BR:
nto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104092518
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104092518
Prokaryotic type
104092518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
104092518
NCBI-ProteinID:
XP_009596426
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Position
1:complement(19745085..19752195)
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AA seq
387 aa
AA seq
DB search
MTNDQSQPLISEISKHSLDPRPESPQRRSKIAKVNDDNIAVDVVEEEEQKELVTRPMNPN
PRLQRYLIAIEYIGTRFAGAQQQTNCRTVVGVLEEAFQKFVGQPVSIFCSSRTDAGVHAL
SNVCHVDVERISKRKPGEVLPPHKPLVVQRAVNHFLQKNGGDIMVIDVRRVPADFHARYK
AQERTYFYRLLSGPEWVSSFEKDRAWHVPESLDLPAMQKACNVLVGRHDFSSFRAAACQA
NSPVRTLEELNVTEVVSTPYFPSISERLRSNSVMEDPTVSLGSDTNYSRTSLTSNEGKSD
GTNGEACQDFGLRRKHRCFVVTARARSFLYHQVRLLVGVLKAVGAGDLTVPDVERILEAK
SITAASPMAPACGLYLGHVKYDLPPET
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgatcaatcacagccgttgatctcggagattagtaagcactcgctcgatcca
cggcctgaatctccccaacggcgttccaaaatcgccaaggtaaacgacgacaacatcgcc
gtcgacgtcgttgaagaggaagagcagaaagagttagttactagaccaatgaatcctaat
cctaggctacagcggtacttgatagcaatcgagtacataggaactcgcttcgccggcgca
cagcaacaaactaattgtagaactgtcgtcggtgttcttgaggaagcatttcagaagttt
gttggacagccagtgtctatattttgctccagtcgaactgatgctggagtacacgcttta
tcaaatgtttgccatgtagatgttgaaaggataagcaaaaggaaacctggtgaagtgtta
cctcctcataaacctttggtggtacaaagagctgtgaaccattttttacagaagaacggg
ggtgatataatggttattgacgttcggcgtgttccagctgattttcatgccagatataaa
gctcaagaacgcacgtacttctaccgcttgttatctgggccggagtgggtatcaagcttc
gagaaagaccgagcttggcatgtgcctgagagcctggatcttcctgccatgcagaaggca
tgcaacgttcttgttggacgtcatgatttcagttctttcagagcagctgcttgtcaggca
aactcacccgtcagaactttggaagaacttaatgttactgaggttgtttcaactccatat
tttccatcaatctcagagagactaaggagcaatagtgtgatggaggatccaactgtatcc
ttgggttcagacaccaactattcccgtacttctttgacctccaatgaggggaagtcagac
ggcacaaatggcgaggcttgccaagactttggccttagaagaaaacaccgttgctttgtg
gtgacagcaagagcacgatctttcctttaccatcaggttaggctgcttgttggagtcctt
aaagcagttggggctggagatctaacagttcctgatgtagaacgcatccttgaagcaaaa
tccatcactgctgcaagtccgatggctcctgcttgtggtctttatcttggacacgtcaaa
tatgatctgcctcccgagacttga
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