Nicotiana tomentosiformis: 104092531
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Entry
104092531 CDS
T05025
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104092531
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nto01002
]
104092531
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104092531
04121 Ubiquitin system [BR:
nto04121
]
104092531
Enzymes [BR:
nto01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104092531
Peptidases and inhibitors [BR:
nto01002
]
Metallo peptidases
Family M67
104092531
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Others
Others
104092531
Ubiquitin system [BR:
nto04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
104092531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
104092531
NCBI-ProteinID:
XP_009596443
LinkDB
All DBs
Position
3:complement(139452599..139460921)
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AA seq
518 aa
AA seq
DB search
MMTRSSSGQINIEARTKKLDVDNRISLRIYYRIADNVLKQADIFRAEGDVIDLYVMLLRF
SSLVSETIPCHRDYRASLLSNKIYLKKRLLNAVAELEQLKPIVQQKLEELNRKSTYQVNK
GNNHHQNNLLGFSGEFYPANKQNPKACGTTKVVAPVRDFVSQVPRTQQFLLVKPVNEQMR
HLSLSIPRPKEETLTRHSILGPNGLRGQWQPPASDRGVSYPSNVDFTPVLIPRENRLLQP
LENESLDKKDDVSSECGKPCLESTLPVDSDKPVLRLEEPASLISFDTEEIPLQSEIIRQP
SPPPVLAEVQDLMPPASSPVDEVECGLVKSSPDGLICSEEPLQLHISTSLMDAFMKLAKS
NTNKNLETCGVLAGSLKNRRFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGW
IHTHPTQSCFMSSIDVHTQYSYQIMLPEAIAIVMAPRDSSRTHGIFRLTNPGGMTVIRQC
PRRGFHPHDPPPDGSPIYKHCTDVYMDSKLKFDVIDLR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcggtcgtcttctggtcaaatcaacatcgaggcgcgtacgaagaaactcgat
gtagataatcgaatctctctgagaatttactatcggatcgctgataatgtcctcaaacag
gctgacattttccgcgcagagggagacgtcatagatttatatgtcatgcttcttagattc
tcaagtttggtctctgagacaataccatgccatcgagattatcgagcatcactgctgagc
aacaaaatttatctaaaaaagagattactaaatgctgtggctgagcttgagcaactgaag
ccaatagttcaacagaaactcgaggagctaaatagaaaaagcacatatcaagtgaataag
gggaacaatcatcatcaaaataatcttttaggattctcaggagagttttatccagccaat
aagcaaaaccctaaggcttgtggaacaactaaggtagtagcaccagttcgagattttgtg
tctcaagtcccaagaacccagcagtttttgcttgtgaagccagtaaatgagcagatgcgc
catttgtcacttagtataccgcgaccaaaggaagaaactctgaccagacattctatcctg
ggtccaaatggacttcgaggacagtggcaacctccagctagtgacagaggggtgtcttat
ccaagtaatgttgacttcactcctgttctaatccccagggaaaacaggctcctgcagcct
ctagaaaatgaatccttggataaaaaggatgacgtcagttcagaatgtggaaaaccatgt
ctggaatctacgttaccggtagatagtgacaagccagtgcttcgtcttgaagaacctgct
tcattgatttcctttgatacagaagaaatccctctacaatcagaaatcattagacaaccg
tctcctccacctgttcttgcagaggtacaagatttgatgccacctgcatcatctccagtc
gatgaggtggaatgtggattggttaaatcatcacctgatggcctaatctgctctgaagaa
ccattgcaattgcacatttcaacatctctgatggatgcattcatgaagctagccaagtcc
aatactaacaaaaatctggaaacctgtggtgttcttgctggatcacttaaaaaccgaaga
ttttatgtcacagctctcatcattcccaagcaggaatcgacatcagattcgtgtcaaact
acaaatgaggaggaaatatttgaagttcaagataagcaatcactctttccccttgggtgg
attcatacacatccaacgcaatcatgtttcatgtcatccattgatgttcatacccagtac
tcatatcagatcatgttgcctgaagctattgcaattgtaatggccccaagagacagttca
agaactcatggaatattccgattgacgaatccgggtggtatgacagtaatacgacaatgt
ccgaggcgtggttttcatccacatgacccccctcctgatggtagcccaatttataagcat
tgtacagatgtctatatggattctaaattgaagttcgatgtcattgatcttcgatga
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