KEGG   Nicotiana tomentosiformis: 104092763
Entry
104092763         CDS       T05025                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104092763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nto03021]
    104092763
   03036 Chromosome and associated proteins [BR:nto03036]
    104092763
Transcription machinery [BR:nto03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104092763
Chromosome and associated proteins [BR:nto03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    104092763
   PBAF complex
    104092763
   GBAF(ncBAF) complex
    104092763
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Pox_Ag35
Other DBs
NCBI-GeneID: 104092763
NCBI-ProteinID: XP_009596722
LinkDB
Position
6:complement(109813112..109826291)
AA seq 790 aa
MPASSSETRNRWRRRKREPLISRKAKAQQDDDVFEEEEDEEDIDQQEIEDDDHRNPSNSV
DRSNYSVEMVSEAGDRISEFPLVVRRTVTRPHSSVLNIVATEKAGQCGESRQNGVVLENM
SYGQLQALSAVPADSPALLTEERGEGSGGGSYVISPPQILQGRGVVKHYGSASRIHVVPM
HADWFSPNTVHRLERQVVPHFFSGKSAEHTPEKYMECRNCIVAKYMELPEKHLSVADCHG
VVAGVSADDVTRIARFLDHWGIINYCAVPPKGEALKDVTLYEDSNSDLCVPVAGLKSIDS
LVQFDKPKCCLKARDVYPELVRDFDDDSDFDNSIRELLSELRCNCCSRPVSLSYYQSQKE
IDILLCLDCFHEGGFVTGHSSLDFVKVSSMKDYGDLDGDTWTDQETLLLLEGMQLYNENW
NQIAEHVGTKSKAQCILHFVRLPVDGAPLENIELPGASGPSSSFAGEDHNKSYSNLNGNL
AGPSTENLDSDSKFPFENCGNPVMSLVAFLASAVGPRVAAACAHASLAALSKDDTLTSRN
MTQIDGSTANNGISVGRIHGKDGSPHGDVGNSYQLKDEKPGGQGPWGQHDAGGAPVSTER
VRAAAKVGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVETLLMKEC
EQLERTRHRFAAERARMMTVQPGSVRVSRPMGVSGAGAPVVSNIGNSRQQVVSGPLQQSF
ISGYGNNQPMHPNMSFMQQQGMYGFGPRLPLSAIHPSSSTPGMFNAPASSQPALSHSMLR
PVSGTKSGLG
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcctgcttcctcctcagagacgaggaataggtggaggaggcggaagcgggagccttta
atttcaaggaaggccaaggcccaacaagatgatgacgtgtttgaagaagaagaagacgag
gaagatattgaccagcaggaaattgaagatgacgaccatcgaaaccctagcaattcagtg
gatcggagtaattactcagttgaaatggtatcagaagctggggaccgaattagcgagttc
cctttagtagttagacgtactgttactcggcctcattcgtccgtcctgaatattgtagcg
actgagaaggctgggcagtgtggggagagtaggcagaatggggtggtgttggagaatatg
tcgtatgggcagcttcaggcgctttcagctgtgcctgcagatagtccggctttgttgact
gaggaaagaggagaaggcagtgggggtggttcgtatgtgatcagtcctccgcagatattg
cagggtcgtggtgtcgttaagcattatggcagtgcaagtcgaattcatgttgtgccaatg
cacgcagattggttttcacctaatacagtgcacagattggaaagacaagtggtgccgcat
tttttctctggaaagtcagctgaacatacaccagaaaaatacatggaatgcagaaattgt
atagttgcaaagtatatggagttgcctgaaaagcacttgtcagttgctgattgccatggg
gttgtagctggtgttagtgctgatgatgtaactcgaattgcaaggtttcttgatcattgg
gggatcatcaactactgtgctgttcctcctaaaggtgaggccctaaaagatgtcacattg
tacgaggactcaaacagtgatctctgtgttccagtggctggtttgaagtctatcgacagc
ttagtccagtttgacaagcctaaatgttgtctcaaggcgagagatgtttatcctgaactt
gtgcgtgattttgatgatgactccgactttgacaactcaatccgtgaactgttgtctgaa
ctacgatgcaattgttgttctcgccctgtttcactgtcgtactatcagtcacagaaagag
attgatattctattgtgtttggattgcttccacgagggtggatttgtcactggtcactct
agcttggatttcgtcaaagtaagctctatgaaagattatggagatctagatggagatact
tggactgaccaggaaacactattgcttctcgagggaatgcaactctacaatgaaaactgg
aatcaaattgcagaacatgttggcaccaagtcaaaggcacagtgcatccttcattttgtc
cgcctgcctgtggatggtgccccattggaaaatattgaacttccaggtgcatctggtccc
tcaagttcttttgcgggtgaagatcataacaaatcttattcaaatttgaacgggaatctt
gcaggaccaagcactgaaaaccttgattctgatagcaaatttccttttgaaaactgtggc
aatccagtaatgtccctggttgcttttttggcatctgccgtgggaccgagagttgctgca
gcatgtgcccatgcttccttggcagcattgtccaaggatgatactttaacatcacggaat
atgactcagatagatggatctacagctaataacgggatcagtgtaggaagaattcatgga
aaggatggaagtcctcatggagatgttggaaattcttatcagctaaaagatgaaaagccg
ggaggacaaggtccatggggtcaacacgatgctggaggtgctccagtgtccactgaaaga
gtaagagctgctgctaaagtcggtcttgcagctgcagctataaaggcaaagctttttgct
gaccatgaagaacgtgagattcaacggttatctgcaaacatagtcaaccatcagttaaag
aggttagagctgaagctgaagcagtttgcagaggtggagaccttgttaatgaaagaatgt
gaacaactggagagaacaaggcaccgctttgctgcagaacgtgctcgaatgatgacagtt
caacctggttcagttcgagtatcccgaccaatgggtgtgtctggtgctggtgcgccggtg
gtcagtaacataggaaatagtaggcaacaagttgtttcaggtcctctacaacaaagtttt
atttctggatatggaaacaaccaaccaatgcatcccaacatgtcatttatgcagcaacaa
gggatgtatggatttggccctcggctgcctctctcagcgatacacccgtcctcttcaaca
cccggtatgtttaatgctccagcaagttcccagcctgctctcagtcattcaatgcttaga
cctgtatctgggacaaaatctggtttgggttga

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