Nicotiana tomentosiformis: 104092763
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Entry
104092763 CDS
T05025
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104092763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104092763
03036 Chromosome and associated proteins [BR:
nto03036
]
104092763
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104092763
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104092763
PBAF complex
104092763
GBAF(ncBAF) complex
104092763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
104092763
NCBI-ProteinID:
XP_009596722
LinkDB
All DBs
Position
6:complement(109813112..109826291)
Genome browser
AA seq
790 aa
AA seq
DB search
MPASSSETRNRWRRRKREPLISRKAKAQQDDDVFEEEEDEEDIDQQEIEDDDHRNPSNSV
DRSNYSVEMVSEAGDRISEFPLVVRRTVTRPHSSVLNIVATEKAGQCGESRQNGVVLENM
SYGQLQALSAVPADSPALLTEERGEGSGGGSYVISPPQILQGRGVVKHYGSASRIHVVPM
HADWFSPNTVHRLERQVVPHFFSGKSAEHTPEKYMECRNCIVAKYMELPEKHLSVADCHG
VVAGVSADDVTRIARFLDHWGIINYCAVPPKGEALKDVTLYEDSNSDLCVPVAGLKSIDS
LVQFDKPKCCLKARDVYPELVRDFDDDSDFDNSIRELLSELRCNCCSRPVSLSYYQSQKE
IDILLCLDCFHEGGFVTGHSSLDFVKVSSMKDYGDLDGDTWTDQETLLLLEGMQLYNENW
NQIAEHVGTKSKAQCILHFVRLPVDGAPLENIELPGASGPSSSFAGEDHNKSYSNLNGNL
AGPSTENLDSDSKFPFENCGNPVMSLVAFLASAVGPRVAAACAHASLAALSKDDTLTSRN
MTQIDGSTANNGISVGRIHGKDGSPHGDVGNSYQLKDEKPGGQGPWGQHDAGGAPVSTER
VRAAAKVGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVETLLMKEC
EQLERTRHRFAAERARMMTVQPGSVRVSRPMGVSGAGAPVVSNIGNSRQQVVSGPLQQSF
ISGYGNNQPMHPNMSFMQQQGMYGFGPRLPLSAIHPSSSTPGMFNAPASSQPALSHSMLR
PVSGTKSGLG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcctcctcagagacgaggaataggtggaggaggcggaagcgggagccttta
atttcaaggaaggccaaggcccaacaagatgatgacgtgtttgaagaagaagaagacgag
gaagatattgaccagcaggaaattgaagatgacgaccatcgaaaccctagcaattcagtg
gatcggagtaattactcagttgaaatggtatcagaagctggggaccgaattagcgagttc
cctttagtagttagacgtactgttactcggcctcattcgtccgtcctgaatattgtagcg
actgagaaggctgggcagtgtggggagagtaggcagaatggggtggtgttggagaatatg
tcgtatgggcagcttcaggcgctttcagctgtgcctgcagatagtccggctttgttgact
gaggaaagaggagaaggcagtgggggtggttcgtatgtgatcagtcctccgcagatattg
cagggtcgtggtgtcgttaagcattatggcagtgcaagtcgaattcatgttgtgccaatg
cacgcagattggttttcacctaatacagtgcacagattggaaagacaagtggtgccgcat
tttttctctggaaagtcagctgaacatacaccagaaaaatacatggaatgcagaaattgt
atagttgcaaagtatatggagttgcctgaaaagcacttgtcagttgctgattgccatggg
gttgtagctggtgttagtgctgatgatgtaactcgaattgcaaggtttcttgatcattgg
gggatcatcaactactgtgctgttcctcctaaaggtgaggccctaaaagatgtcacattg
tacgaggactcaaacagtgatctctgtgttccagtggctggtttgaagtctatcgacagc
ttagtccagtttgacaagcctaaatgttgtctcaaggcgagagatgtttatcctgaactt
gtgcgtgattttgatgatgactccgactttgacaactcaatccgtgaactgttgtctgaa
ctacgatgcaattgttgttctcgccctgtttcactgtcgtactatcagtcacagaaagag
attgatattctattgtgtttggattgcttccacgagggtggatttgtcactggtcactct
agcttggatttcgtcaaagtaagctctatgaaagattatggagatctagatggagatact
tggactgaccaggaaacactattgcttctcgagggaatgcaactctacaatgaaaactgg
aatcaaattgcagaacatgttggcaccaagtcaaaggcacagtgcatccttcattttgtc
cgcctgcctgtggatggtgccccattggaaaatattgaacttccaggtgcatctggtccc
tcaagttcttttgcgggtgaagatcataacaaatcttattcaaatttgaacgggaatctt
gcaggaccaagcactgaaaaccttgattctgatagcaaatttccttttgaaaactgtggc
aatccagtaatgtccctggttgcttttttggcatctgccgtgggaccgagagttgctgca
gcatgtgcccatgcttccttggcagcattgtccaaggatgatactttaacatcacggaat
atgactcagatagatggatctacagctaataacgggatcagtgtaggaagaattcatgga
aaggatggaagtcctcatggagatgttggaaattcttatcagctaaaagatgaaaagccg
ggaggacaaggtccatggggtcaacacgatgctggaggtgctccagtgtccactgaaaga
gtaagagctgctgctaaagtcggtcttgcagctgcagctataaaggcaaagctttttgct
gaccatgaagaacgtgagattcaacggttatctgcaaacatagtcaaccatcagttaaag
aggttagagctgaagctgaagcagtttgcagaggtggagaccttgttaatgaaagaatgt
gaacaactggagagaacaaggcaccgctttgctgcagaacgtgctcgaatgatgacagtt
caacctggttcagttcgagtatcccgaccaatgggtgtgtctggtgctggtgcgccggtg
gtcagtaacataggaaatagtaggcaacaagttgtttcaggtcctctacaacaaagtttt
atttctggatatggaaacaaccaaccaatgcatcccaacatgtcatttatgcagcaacaa
gggatgtatggatttggccctcggctgcctctctcagcgatacacccgtcctcttcaaca
cccggtatgtttaatgctccagcaagttcccagcctgctctcagtcattcaatgcttaga
cctgtatctgggacaaaatctggtttgggttga
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