Nicotiana tomentosiformis: 104092869
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Entry
104092869 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104092869
Enzymes [BR:
nto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104092869
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104092869
Prokaryotic type
104092869
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
104092869
NCBI-ProteinID:
XP_009596847
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Position
5:complement(7767002..7771809)
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AA seq
327 aa
AA seq
DB search
MCFSAALALPSIPNLELSSSNSTSNWSGKDEDPNKSQAVKLSLPAYKWRFVIAYDGTRFS
GWQYQQSTPTIQCILEEALTTITKLNRKDLCSVGASRTDAGVHALGQVGHFITPFNYETL
EGVHQALNGLLPSDIRVREISPAVPEFHARFSVTSKIYCYQVYNSTIMDPFTRHYAYHST
YKLDAAVMRVAAGHFLGKHDFSAFANTSRNDRVPNPVKTIFRFDVVEKGPLLRLEVEGSG
FLYRQVRNMVALLLQVGRQAVPPDIVVRILESRDRKELAKYALQVPPHGLCLETINYNEE
HLRLPTDSPASSFGRHHSISYCKVPFI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttcagcagctttggcacttccatcaattcccaatctcgagctttcttcttcc
aattctacctctaattggagtggaaaggacgaagatccaaataagagtcaagcggtgaaa
ttgtcattaccagcttataaatggcgctttgttattgcttacgacggtaccagattttca
ggatggcagtatcagcagtcaacacctactatacagtgcattctggaagaagctctgact
acaataacaaaattaaaccgcaaagatctttgctcagttggtgcaagtcgaacagatgca
ggcgttcatgcattgggtcaggtgggacacttcattacgcctttcaactatgaaacgcta
gaaggcgttcaccaagctttaaatggtcttcttccttctgatatccgagttagagaaatc
agccctgcggtgcctgaatttcatgctcgtttctctgtcacaagcaagatttattgctac
caagtgtataattccactatcatggacccatttacgaggcactatgcttaccatagcaca
tataaactcgacgctgctgtcatgagagtggctgcagggcattttttggggaaacatgac
ttttctgcctttgccaatacatcacgaaatgaccgagtgccaaatccagtgaagacaatt
tttcgatttgatgttgttgaaaagggacctcttttacggcttgaagttgaaggatctggt
ttcctatatagacaagttcggaacatggttgccttgctgcttcaagttggaagacaagca
gttccacctgatattgttgttaggattttggaatctcgtgataggaaggaacttgcgaag
tatgccttgcaagttccacctcatggcctttgtctcgagactatcaactataatgaagaa
catctcagacttccaacagattcccctgcaagtagttttggtaggcaccatagtataagc
tattgtaaggtgccattcatatga
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