Nicotiana tomentosiformis: 104092887
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Entry
104092887 CDS
T05025
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104092887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104092887
03009 Ribosome biogenesis [BR:
nto03009
]
104092887
04131 Membrane trafficking [BR:
nto04131
]
104092887
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104092887
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104092887
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104092887
Membrane trafficking [BR:
nto04131
]
SNARE
SNARE associated proteins
Others
104092887
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104092887
Exosome [BR:
nto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104092887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
AAA_lid_PRS2_C
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
104092887
NCBI-ProteinID:
XP_009596867
LinkDB
All DBs
Position
6:complement(87839702..87845591)
Genome browser
AA seq
805 aa
AA seq
DB search
MSHQAESSDSKGAKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALNPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSEN
PDSMDEDADDEIAEITPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
ASGGAAATDPFATSNAGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcatctgactccaaaggtgcgaagaaggatttctctacggcg
attttggagcgcaagaagtctccgaatcggctcgtcgttgacgaggcggtcaacgatgat
aactccgtcgtcgccctaaatcctgccaccatggagaagctccagctcttccgtggagat
acaattctcatcaagggaaagaaaaggaaggatacagttgtcattgcccttgctgacgaa
acgtgcgatgagccgaagattaggatgaacaaggttgtccgttcaaatttgagggttcgg
cttggagatgttgtgtctgtgcaccaatgtccagatgttaagtatggaaagcgtgtgcac
atacttcccatagatgatacaatagaaggtctcaccggggatttgtttgatgcattcttg
aaaccttactttttggaagcatatcgtcctttgaggaaaggggacaatttccttgttaga
ggagggatgagaagtgtggaatttaaagtcatcgagactgaccctggggagtattgtgtt
gttgctccagacacagaaatcttttgtgagggggagcctgttaaaagggaggatgaggag
agactggacgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcagatt
cgtgaattggtggaattaccattgaggcatccacagctttttaaatccattggtgtgaaa
ccaccaaaggggattttactttatggaccccctggatctgggaagaccctgatagccaga
gctgtggctaatgaaacaggtgcatttttcttttgcattaatggaccagaaatcatgtcc
aaattggctggagagagtgaaagcaatctcaggaaggcgtttgaagaggctgagaaaaat
gctccatctattatattcattgatgaaattgattcaattgctcccaagcgagagaagaca
catggtgaagttgagagaaggattgtttcacagctcctcacactgatggatggattgaaa
tctcgtgctcatgtcatagttatgggagctaccaatcgtcctaacagcattgatcctgct
ctcagaaggtttggtaggtttgatagggaaattgacattggtgttcctgatgaaattgga
cgccttgaagttcttcgtattcataccaagaatatgaagcttgcagaagaagttgatttg
gaaagaatatcaaaagatacacatggttatgttggtgcagatcttgctgctctttgcacg
gaagctgcacttcagtgtattagagagaaaatggatgtcattgatcttgaagatgattcc
attgatgctgaaatattgaactcaatggctgtcacgaatgagcacttccaaactgctcta
ggaacaagcaatccatccgcattgcgtgaaacagttgttgaagtgcctaatgtctcatgg
gaagacattggaggccttgaaaatgtcaaaagagagcttcaagagactgttcaataccct
gtggagcatccagagaagttcgagaaatttggtatgtcaccttcaaaaggtgttcttttc
tatggtcctccaggatgtgggaaaactcttcttgccaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtcaaaggacctgagctgctcaccatgtggtttggagagagtgag
gccaatgtccgtgaaatttttgacaaggccagacaatctgcaccctgtgtcctcttcttt
gatgagctcgactctattgctactcagaggggaagcagtgttggagatgctggtggagca
gctgatcgggttctgaaccaacttctgactgaaatggacggcatgaacgcaaagaagacc
gtttttataattggggccacaaacaggcctgatataattgaccctgcacttctgcgacct
ggtcgacttgaccagttaatttatatcccactcccagatgaagactcgcgccatcagatt
ttcaaggcgtgtcttagaaaatctccgctctcaaaagatgtcgatttgagagctcttgcc
aaatatactcagggattcagtggagctgatatcactgagatctgtcaacgggcctgcaaa
tatgccataagggagaacattgagaaagatatagaaaaggaaaggaaacgaagcgagaat
cctgattctatggatgaggatgctgatgatgagatagcagagattacgccctcgcatttt
gaggagtccatgaagtatgcacgacgaagtgtgagtgacgcagatatacgtaaataccag
gcatttgctcagaccttacagcaatctcgaggttttggaactgaatttcggtttgctgag
gcaagtggtggggctgctgcaactgacccctttgcaacttctaatgctggagctgatgat
gatgacttgtatagctaa
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integrated database retrieval system
