Nicotiana tomentosiformis: 104092907
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Entry
104092907 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104092907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104092907
03036 Chromosome and associated proteins [BR:
nto03036
]
104092907
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104092907
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104092907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104092907
NCBI-ProteinID:
XP_009596897
LinkDB
All DBs
Position
8:complement(146043491..146057563)
Genome browser
AA seq
1022 aa
AA seq
DB search
MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFGT
PQSSSPLGSTPVFGASSSPAFGSTTPAFGASSTPTFGSSSSAFGSSSVFGQKPAFGGFGS
SSAQTSPFGSSFQQSQPAFGSGLFGSSAPFGASSQPAFGTPSTPTFGSSSTPAFGATSAP
AFGTSSTPAFGSTPNPAFGSTASPFGASNSPIFGSSTPAFGATSTPAFGATGSPAFGATT
TPAFGAPSAPSFSFGSAPAFGQSTSAFGSSPFGTSTSTFGAQSSAFGAQTSAATFGSPGF
AQSAVGGQRGGTRVAAYQATPEADSGSGTQPAGKLESISAMPVYRDKSHEELRWEDYQLG
DKGGPASAGQSTSGINFGSSAFASSSTSPFGQSSSNPFSSTTTSNPFAPKPPAFSPSGFG
TSATPTFSSSPFASSNASNPFGSTSSTTPSLFGPSAPAFGTNTSPSLFGSSSASGFGSST
SIFGSSSAQATAPAFGPSLSFGNTQSSPLFQSTTPSFGQTSSAFGQTASSFAQSTPAFGQ
SNLFSTPSTGFGGNLFSSAPLLNTSNPIGFGQTTPSLSTPFQLTQPSQSTAFGFSNYGQA
QGGGASGFGGTPSLFSQPSANQSSVVAQPAVVTNPFGTLPAMPQMSIGRTGTSSSIQYGI
SSLPVVDKPVPVRISSLLTSRHLSQRRVRLPARKYHPKTEGAKVPFFSDDEETPSTPKAD
ALFVPRENPRALVIRPLDQWPSRGGFEKVSPSKHTSPAHENGKIPEVVFAPVTETSAKDK
NKDLVENGLDKEGLHSAKLNQKPNGLHERHHLQKGAGSSITLTGHRAGEAAIVYEHGADI
EALMPKLRHSDYYTEPRVQELAAKERAEPGFCRHVKDFVVGRHEYGSIKFIGETDVRRLD
LESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFDKKTGQHYTEGPRIDKYK
DMLKRKAGDQGAEFVSYDPVKGEWKFRVQHFSKYRLQEDNEDECGEYCFGNFVMPSGKKN
VR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttccacgaatgctttcgggcagtcatctactagcccgtttgggtcacaatca
ggttttgggcagacaagtaataatccctttgctcccaaaccttttggtagtacaaatcct
tttggttcgcaatctggtggttccttttttggtagcacttccactggagtgttcggaact
ccccaatcttcttcacctctagggtccacaccagtctttggtgcatcatcctcacctgca
tttggaagcactacacctgcatttggagcttcttcaactcctacttttggcagttcgtca
tcggcatttgggagttcatctgtattcgggcagaagccagcttttggtggctttgggtca
agcagtgcccaaacaagtccgtttggcagctcgtttcaacaatcacagccggcatttggg
agtggtctattcggctcatctgcaccttttggtgcatcaagtcaacctgcatttggtact
ccgagcaccccgacgtttggttcatcaagcacccctgcttttggtgccacgagtgcacca
gcatttggtacatcaagtactccagcctttggctctacaccaaacccagcctttggcagt
acagccagcccatttggtgcttcaaattctcctatatttggatctagcaccccggccttt
ggtgccaccagcaccccggcctttggcgccaccggttctcctgcctttggtgccacgaca
actcctgcttttggcgctccgagtgctccttcatttagttttggatccgctcctgcattt
ggccaatcaacatctgcttttggcagtagcccatttggcacatcaacgtcaacttttggt
gctcaaagttctgcatttggagcccaaacttctgcagcaacttttgggagccctggtttt
gcgcagtctgctgttggtggtcaacggggtggaacacgagttgctgcttatcaggcaaca
cctgaagcagacagtggcagtggtacccagccagctgggaaactggagtctatttcggcc
atgccagtttacagagacaagagccatgaagaacttaggtgggaggattaccaattggga
gataaaggaggtcctgcttctgcgggtcagtcaactagtggaatcaattttggaagctca
gcctttgcgtcatcatcaacttccccatttggccagtcatcttcgaatccattttcatcc
actacaacttccaatccatttgcacccaaaccacccgcattcagtccttcaggttttgga
acctcagctaccccgacttttagttcttctccctttgcaagctcaaatgcatctaatcca
tttggctctacatcctcgactaccccttccttatttggaccatcagctccagcttttgga
acaaatacatctccctccctctttggatcatctagtgcttcgggttttggatcatcaaca
tcaatttttggctcctcttcagctcaggctactgctccagcatttggtcctagcttaagc
tttggtaatactcaatcgtctccgttattccagtcaactaccccttcatttggacagacg
agctctgcctttggacaaactgcatcatcttttgcccagagcacaccagcttttggtcaa
tccaatttgttcagtacgccttctactggctttggtgggaacttattttcaagtgcacca
ttgctaaatacaagcaacccaataggatttggccaaacaacaccctctctttcaactcct
tttcaactcactcagccttctcagagtactgcttttgggttcagtaactatggtcaggca
caaggaggtggtgcaagtggttttggtggcacacccagccttttcagtcaaccgtcagct
aaccaaagctcagttgtagcacaaccagcggttgttactaatccatttggaactttaccg
gcgatgcctcagatgtcaattggtcgtactggcacttcgtcttctatacagtatgggatt
tctagtttaccggtggttgacaaacctgttcctgtcaggatatcatcattactgacttct
cgacacctttctcaaagacgggttaggttgccggcaaggaaatatcaccctaaaactgag
ggtgctaaggtgccgttctttagtgacgatgaggagacgccaagcacacctaaggcagat
gcgttgtttgttcctagagagaatccaagagctttagtaattcgtccattggaccagtgg
ccttctagaggtggtttcgagaaagtatccccatcaaagcacacgtccccagcgcatgag
aatggtaaaatccctgaagttgtttttgctccagttactgagaccagtgcaaaagataaa
aacaaagatttggttgagaatggccttgataaagagggtctccatagtgccaaactgaac
cagaaacccaatggtctccatgaaaggcatcacctccaaaaaggagcggggtcttccatt
acccttactggccatcgagctggtgaggcagcaattgtttacgaacatggggctgacatt
gaggctctgatgccaaagctccgccattctgattattacacagagccacgggttcaggaa
ttggcagcaaaggaaagggctgagcctgggttctgtcgccatgtgaaggattttgtggtt
ggtagacatgaatatggaagcatcaagttcatcggggaaacagatgttcgacgacttgat
ctggagtctttgattcagtttaacaatcgggaggtgatagtatatatggatgagagtaag
aaacctcctgttggacaaggtcttaacaagcctgctgaggtgacacttctcaacataaaa
tgttttgataagaagactggacaacactatacagagggtcctagaatcgataaatataag
gatatgcttaagaggaaggcaggagatcaaggtgctgaatttgtgtcctatgatccggtt
aaaggagaatggaagttcagggtgcagcatttcagcaaatataggcttcaagaggacaat
gaagatgaatgtggagaatattgctttggcaattttgtgatgccaagtggcaagaagaat
gttagatag
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integrated database retrieval system
