Nicotiana tomentosiformis: 104092924
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Entry
104092924 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104092924
04121 Ubiquitin system [BR:
nto04121
]
104092924
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104092924
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104092924
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104092924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
zf-RING_16
zf-RING_5
Rad50_zn_hook
VPS18_RING_C
zf-C3H2C3
Zn_ribbon_GTF2H2
Pox_F15
Motif
Other DBs
NCBI-GeneID:
104092924
NCBI-ProteinID:
XP_009596918
LinkDB
All DBs
Position
2:complement(180437259..180438911)
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AA seq
385 aa
AA seq
DB search
MSSSYWCYRCTRFVRISAGSDVVCPYCDSGFIEAAEASNIGSSPETRRRFNGRPDSERSV
NMGSRRSRRNRGGDRSPFNPVIVLRSPSETPAGDDEAAGEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFGRPENPPASKSAIESMPILEIASHHVNTEEHCA
VCKEAFVLGSEAREMPCKHIYHTDCILPWLSLRNSCPVCRHELPAESPGTTTSGDFARSR
NDDEAMGLTIWRLPGGGFAVGRFAGGRRGAERELPVVYTEMDGGFNNGVPRRIAWRSRRS
NTSRNGGGISRIFGNVASFFRRLSPSSQRRRALEIHSSSSDSSGSGSGSAVFRSRSVSST
SVFSRYLRRSSRTWVPEEGNGVTRW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgtattggtgttaccggtgtacgcgatttgttaggatttcagctgggagc
gacgtcgtttgtccgtactgtgatagtggatttattgaagctgctgaggctagtaatatc
ggatcgtcgccggaaactcgccgtagatttaacgggcggccagattcggaacgtagtgtt
aacatgggatctcgccggagccggcgtaatcgcggtggagacagatctccgttcaatcct
gttattgttcttcgtagtccgtcggaaactcctgctggagatgatgaagctgcaggagag
gagcggagttacgagctttactatgacgacggcgaaggttctggtctccgtccgttacca
ccgacgatgtcagagtttttaatgggatctggatttgaccggttgctcgatcagctagca
caaatcgaggtgaacggatttggccggccggagaatcctccggcgtcgaaatcggcgatt
gaatcgatgccgatcttagaaatagcatctcatcacgtgaatacagaagagcattgcgcc
gtttgtaaagaagcttttgttttaggctccgaagcacgtgaaatgccgtgtaaacacatc
taccataccgactgtattctcccgtggctgtcgctacgcaattcatgtcccgtttgccgg
cacgaacttccggcggaatcgccgggaactacaacctctggcgacttcgctcgatcgaga
aatgatgatgaagcgatgggattgacgatatggagactccccggaggtggattcgctgtg
gggagatttgccggcggaagacggggagcggagagggaacttccagtagtgtatacagaa
atggacggcgggtttaacaatggggtgccgagaagaatagcttggagatcaaggaggagt
aatacgagtcgaaatggcggtggaataagccgaattttcggcaatgttgcatcgtttttt
agaagattatcgccttcttctcaacggcggagagcgctcgaaatacattcgagtagttcg
gattcatccgggtccggatcaggatctgctgtatttcggagtcggagcgtttcaagtact
tcagtattcagtagatatttgagaagaagcagtagaacttgggtaccggaagagggtaat
ggagtaactagatggtaa
DBGET
integrated database retrieval system
