Nicotiana tomentosiformis: 104093028
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Entry
104093028 CDS
T05025
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104093028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104093028
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
104093028
Prokaryotic type
Archaeal type
TFB
104093028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
DUF7573
HTH_5
DmmA-like_C
FtrD-like
Motif
Other DBs
NCBI-GeneID:
104093028
NCBI-ProteinID:
XP_009597031
LinkDB
All DBs
Position
12:107508540..107516695
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AA seq
311 aa
AA seq
DB search
MDAYCSDCKKSTEVVFDHSAGDMVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGG
PSNPLLSDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNSDRSLILAFKAIGVMSDRLGL
VATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVKKSEEFD
IRRSPISIAAAVIYIVTQLSDEKKPVKDVSLATGVAEGTIRNSFKDLYPHLSKIIPNWYA
RGQDLKNISSP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtactgttcagactgtaagaagagtacagaagttgtgtttgatcattcagca
ggtgatatggtgtgttcagaatgtgggctagttttggaatctcattcaattgatgaaaca
tctgagtggaggacttttgctaatgagtcaggggataatgacccgaatcgagttggtggg
cccagtaaccctttgctttctgatggtggtttatccactgtgatctctaaacccaatgga
actaccagcgatttcttgacttcctctttgggccgttggcagaatcgtggctctaattcc
gatcgatcccttatcttggcttttaaagccattggtgttatgtctgataggttgggcctg
gttgcaaccataaaggaccgagctaatgagatttacaagaaggtagaagatcaaaaatct
agtagaggaaggaaccaggatgctatattagctgcttgcctatatattgcttgtcgacaa
gaagacaagcctcgaactgtgaaggaaatttgctctgttgcgaatggagctacaaagaag
gaaattggccgagcaaaggaatacatagtgaaacagctagagctcgagatgggtcaatca
gtggaaatgggaactatacatgctggggatttcatgcggcgcttttgttctaatcttggg
atgacaaatcaaacagttaaagctgcccaagaagcagtcaaaaaatccgaagagtttgac
ataaggagaagtcccatttctattgctgcagcagttatctacatagtcacacagctttcg
gatgaaaagaagccagttaaagatgtctcacttgcaactggagttgctgaaggcacgatc
cggaattcgttcaaggatttatacccgcatctctctaagattataccaaattggtacgcc
cggggtcaagaccttaaaaatatcagcagtccttga
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