Nicotiana tomentosiformis: 104093172
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Entry
104093172 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104093172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104093172
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104093172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104093172
NCBI-ProteinID:
XP_009597188
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All DBs
Position
2:4241785..4249139
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AA seq
303 aa
AA seq
DB search
MAAVNGSSELSSEMEVDAFRRLFPLRYHEYHLLKSVRPDARKLGSARDTTLALGAVSSAD
GSALAKIGSTTMLAAIKMEVMTPTMECPDEGSIAIEFHMPPICSPLVRPGRPAETATVIS
KQLSDTIFSSGMIDLKELCLVGGKAAWMAYLDIYCMDADGALFDAALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYILADPTAEE
ESIMETVVTVVLDSSYQLVSLYKPGGPVLAHTSVIQDCVALTRRRVKELQNVLNEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaatggctcaagtgagttgtcttcagagatggaggtggatgcatttaga
cgcctcttccctttgcgctatcatgagtatcatctgcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacacttgcacttggtgccgtttcctctgctgat
ggatcagcactagcaaagattggctccactacaatgctggctgccatcaaaatggaagtc
atgacacctacaatggaatgtccagatgagggatccatagctatcgaatttcacatgcct
cccatttgttctcccctggttcggcctggtaggcctgcagagacagcaacagtaatttca
aagcagctgtcagacactatcttcagttccggcatgattgacttaaaagagttgtgcttg
gttggaggaaaagctgcatggatggcctacctggatatatactgtatggatgctgacggt
gccctgtttgatgctgcattactatctgcagttgctgccttttcacatttgaacattcca
gtagtgtctttgaatgatgatgggcgaatagttcttgtgtctgaggacaatgtcagaggg
aaattggagaaggagcctgtcaataaagagaaaagaaaactgaaattgaactctccacca
ttctccttaacatgcatacttcacaagaactacatcttagcagatcctacagcagaggaa
gaatctataatggaaacagttgtaactgtggtattggattcatcttaccagcttgtttca
ctttataagccaggtggaccagttcttgcccatacatcagttatccaggattgtgttgcg
ctgacaagacgtagagtgaaagagctccagaatgtattgaatgaagctatttcagatatg
gaggtagactga
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