Nicotiana tomentosiformis: 104093192
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Entry
104093192 CDS
T05025
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104093192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104093192
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104093192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
104093192
NCBI-ProteinID:
XP_009597206
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All DBs
Position
5:34337465..34345496
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AA seq
308 aa
AA seq
DB search
MDNLPKPPPLVDQLRRRALLVAQKPPELATASPEQLIALLHDSNLREAVLSRLNIVIKEK
REMCSDLALLLWNSFNTVYLLLQEVLAVYPKLSTSTLTMKESTRVCDALTLLQCMASHPE
TRKGLVKANIPFYLYPFLRASANEKPLEFLRLSSLGVIGSLAKFDDPYGPEILNFFLETQ
LFPLCLRCMDQGDELSRKVATLIVMKILMQEEGLDYSCAFTERFLAVVQALSRLVEKISV
NPCLQLLKYVVQCYLSLSQVSRVCDVLRYKFPPQLIDNTFHIILREDPDTLNMLQQIFFN
ITSRGSRP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggataatttgccaaagcctccgccattggtggaccaactccgccgtagggcattgttg
gtcgcacagaagcctcctgaattggcaacggcctcgccggagcagttgatagcgttgctt
cacgacagtaatcttcgtgaagcggttcttagtcgactcaacattgtgatcaaagagaag
cgagaaatgtgcagcgatcttgctttgttgttgtggaactcctttaatacagtctattta
cttttacaggaagtattagcagtgtacccgaagttgtcaacctcaacgttaaccatgaag
gaatctactcgagtttgtgatgctcttactttacttcagtgtatggcctctcatccagaa
acaaggaaggggctcgtcaaagccaacataccattttatctttacccatttctcagagct
tcagcaaatgagaagcctctggaatttttgaggctaagcagcttgggtgttattggttcc
ctagcaaagtttgatgatccatatggaccagaaattcttaatttcttcctggaaacacaa
ctatttccattgtgcctgcgctgcatggatcagggagatgaactgtcacggaaggttgca
acgctcatagtaatgaaaatcttgatgcaagaggaagggctggactatagctgtgctttc
actgaacggtttttggcagtggtacaagccttgagtcgactggtagaaaagatttctgta
aacccttgtttacagctgctaaaatatgtcgttcaatgttatctgagtctttcgcaagta
tcaagggtatgtgatgtattgagatacaagtttcctccgcagctaattgacaacactttt
cacatcattcttcgtgaagatccagatactctaaatatgttacagcaaatatttttcaac
ataacttcgcggggatctagaccgtaa
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