Nicotiana tomentosiformis: 104093436
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Entry
104093436 CDS
T05025
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104093436
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104093436
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104093436
NCBI-ProteinID:
XP_009597471
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Position
3:43893811..43903540
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AA seq
441 aa
AA seq
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MTDPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVKALQF
YTNVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVDVLHQV
FSPHGFVEKIVTFQKSAGFQALIQFQLQQSAVSARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSSQQGYGDMYSFQGSGAHAGGFPQMGNAEAIAAAFA
GGLPPGISGTNDRCTILVSNLDSDRIDEDKLFNLFSLYGNIVRIKILRNKPDHALVQMGD
GFQAELAVHFLKGAILFDKRLEVNFSKHPNITTGPDTHDYSNSNLNRFNRNAAKNYRYCC
SPTKMIHLSSLPQDVTEGEIVAHLEEHGPIINNKLFEMNGKQQALVLFEKEELATEALVC
KNATSLGGSTIRISFSQLQSI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccttcaaaggtcattcatgttcgcaatgtgggacatgagatctcagagaat
gatttacttcaactattccagccatttggcgtcattaccaaacttgtaatgcttagggca
aaaaatcaggccctcttacaaatgcaagatgtcccttcagctgtaaaggcattgcaattc
tacacaaatgttcagcccagcataagggggaggaatgtttatgttcagttctcatctcac
caagaactgacaactatggatcaaaatacgcaagggcgaggagatgagcctaaccgaatt
ctcttagtcacaatacatcacatgctataccctataactgtggatgtgctgcatcaagtg
ttttctccacatggatttgtagagaagatcgttacgtttcagaagtcggctggttttcaa
gctttaatccagtttcagctacaacaaagtgctgtttctgcaaggaactcacttcagggg
cgtaatatatatgatggctgctgtcagcttgacatacagttctctaacctagatgaattg
caagtgaactacaataatgaacgttcaagggacttcactaacccgaatctaccatcagaa
cagaagggcaaatcctctcagcaaggatatggagatatgtactccttccaaggttctgga
gctcatgcaggtggatttcctcagatgggaaatgctgaagcaattgcagctgcgtttgct
ggtggtttgccacctggaattagcgggacaaatgacagatgtactattcttgtgtctaat
ttagattcagatagaatagatgaggacaagctttttaatctcttttccctttatggaaac
attgtcagaattaagattctgcgcaataaaccagatcatgcgctggttcagatgggtgat
ggcttccaggctgagttggctgttcattttttgaagggcgccatattatttgataagcgg
ctggaagtcaacttctcaaagcaccccaatattactaccggaccggacacacatgactac
tcaaattcaaatctcaaccgatttaaccgtaatgctgctaaaaactaccggtattgttgc
tctcctactaagatgatccacctgtcctccctgccccaggatgtaacagagggagagatc
gtggcacatctggaggagcatggtcccatcatcaataataagctgtttgagatgaatggc
aaacagcaggctcttgttctttttgaaaaggaggagctggcaactgaggcactggtatgc
aaaaatgctacatcccttggtggctcaaccatccgcatttcgttttctcagttacagagc
atctga
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