Nicotiana tomentosiformis: 104093476
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Entry
104093476 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K11790
denticleless
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104093476
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104093476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
EIF3I
Beta-prop_EIPR1
MIOS_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104093476
NCBI-ProteinID:
XP_009597523
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Position
2:complement(96348365..96353501)
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AA seq
513 aa
AA seq
DB search
MDGSKHQSFFQDINSRELNGYRVKRRPYISHESSDFNEIGALVVDHNGFTPPPMALSFCK
TSKNSHILAVADEGGYLSLFNTRVRFPSSSTHRQNAEKAKVSEWAAHDNAIFDVCWIKED
TNILTASGDQSIKVWDAQGKKCVRALMGHTGSVKSICPHPTNHDIIVSGARDGSFALWDL
RCSDSSSENLCIPSIATVHEAHMPPHQRRTRRGKASPVSITSILYLKDELSIASAGAVDS
VIKFWDTRNLKCPIIQACPHPEVSIQKGKRFHGVSSLSQDLNGVFISASCMDSRIYLYSV
LQADKGPVKTFKGCKIESFFVKSALSSDAAHILGGSSDGSAYVWQVNKPLEDPIMLKGHD
EEVTALDWCTSETGKVATTSDDFTVRFWNIHSSCYSNTRSPSSIRRRVTAFSCMQRRKLF
SDEKPASIKNDSTNCDSNLTCHQELPDLITIPEMSTPVSKKKKYLPGFELQENFEKTPEA
AKRSPSSVLTPPSSLRKTIRDYFVVTPSGLHSQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatggatccaagcatcaatctttcttccaagatatcaattcaagggagcttaatgga
tacagagttaaacgacgaccttatatcagtcacgaatcgtctgatttcaacgaaattgga
gctctggtagttgaccacaacggcttcacgccacctccaatggccctttctttctgcaag
acgagtaaaaactcgcatattcttgctgtggctgacgagggtggctaccttagcttgttt
aacactcgggtcagatttccttcttcttctactcacaggcaaaatgcagaaaaagctaag
gtgtcagagtgggctgctcatgataatgccatatttgatgtatgttggatcaaggaagat
accaatatcttaacagcttcaggtgatcaaagtataaaggtatgggatgcacaaggaaaa
aaatgtgtgagagcactaatgggtcacactgggagtgtgaaatccatttgtcctcatcct
acaaatcatgatattattgtttctggtgccagagatgggtcttttgccctttgggacttg
aggtgctctgacagtagcagtgaaaacctttgcataccgtcaattgctactgtccatgag
gctcacatgcctcctcatcagaggagaaccagacgtggaaaggcttctcccgtgagcatt
acatcaattctttacctaaaagatgagctctccatagctagtgctggagcagttgacagt
gtcataaagttctgggatacaaggaatctcaaatgtcctattattcaggcatgccctcat
cctgaggtgtctattcagaagggaaagcgattccatggagtatctagtttgtctcaagac
ttaaatggagtgtttatttctgcatcatgcatggacagcagaatctacctctatagtgta
cttcaggcagataaagggccagtaaaaactttcaaaggatgcaaaatagaatcatttttt
gtcaagtcagctctaagttctgacgcagctcatattctcggtggttccagtgatggaagt
gcctacgtatggcaggtaaacaaacctcttgaagatccgattatgttgaaaggtcatgat
gaagaagttacagcactagattggtgcacatcagaaactggtaaagttgctacaacatca
gatgatttcacagtgcgtttttggaacattcacagcagttgttattcaaatacaagatct
ccatcatccatcagaaggagagtaacagcattttcttgtatgcaacgtcggaagctgttt
tcagatgaaaaaccagccagcatcaagaatgactctactaactgtgactcaaacttgaca
tgtcatcaagaattgcctgatcttattaccatccctgaaatgagtactccagtttcaaag
aagaaaaaatatttaccaggttttgaacttcaagagaattttgagaaaactccagaagct
gcaaagagaagcccttcttctgttctgactcccccttcctctttgaggaaaacaatcaga
gattattttgtagtaacaccttcaggcttacacagtcaatga
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