KEGG   Nicotiana tomentosiformis: 104093487
Entry
104093487         CDS       T05025                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nto04812]
    104093487
Cytoskeleton proteins [BR:nto04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104093487
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F PROPPIN VPS8_N WS_DGAT_cat
Other DBs
NCBI-GeneID: 104093487
NCBI-ProteinID: XP_009597532
LinkDB
Position
4:complement(59790508..59820997)
AA seq 798 aa
MTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHSRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCMTFNPDG
RTLLCGLHESLKVCSWEPIRCHDTVDVGWSRLSDLNIHEEKLLGCSYNQSCVGVWVVDIS
RLEPYAMGNTARLNGHPDVKSNSGGNLSNLADDGTKASSGRLLISQNCDPVKETKSFGRL
SVSQNLELQRDSRTLTTTANAPGTPQRINLSVGAKAPPINTTAFPNTTGLKRNSAKAQSA
AANSSIVNRSEVIPIIVPRNNDRMEQVSEPRKGVVATRAMQQSLQTKVSDSRRFSTFKED
LGRPNAVSQFDIEVPKAIEFSSTADKSNFPSVIAGAAATEKNVKDDKSLVSAKLETHSAP
ELFSGNQNENYETRGNVISRSAYPMEGQRRARTRSVVANWEKRDRIPSHEGLASNTVVGI
VPALNMLSTNLRGHPSSAESVTVSATDEDTITDLLEQHDQFVGLMQSRLAKLQVVYQCWQ
RHDIKGALSAMEKMADTAVLADVISFLTEKNDIITLEICTCLLPLLVGMLESSLDRHQDI
SLNMLLKLVKVFGSVIYSSLSAPASVGVDIEAEQRMDRYNLCFLELEKVKHWLPTLTRRG
GSIAKSAQELSLALQDVS
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgactactactaagcgtgcttataagctacaggaattcgtagcacattctttaagcgtg
aactgcttgaagattggacgcaagtcatccagggttcttgtaaccggaggagaagatcac
aaggttaacctttgggccattggcaagcccaatgccatcttgagtttgtcaggtcattca
agcggaattgattcagttagctttgattcttcagaggtgttggtagctgcaggagcagca
agtggtactatcaagctttgggatttagaggaggccaagattgttcgcacactcactgga
caccgatccaactgcatatcgttggacttccatccctttggcgagttctttgcatctggg
tctctagatacaaacctaaagatatgggatatcagacgcaaaggatgtatccacacatac
aaaggtcacagtagaggtgtcaatgccatcaggttcactccagatggccgatgggttgta
tctggtggggaagacaatactgtcaagctttgggatttgactgcaggaaagcttttacac
gatttcaaatgtcacgaagggcagattcagtgcatagactttcatccccatgagtttcta
ctggcaacaggttctgccgacagaactgtaaaattctgggacctcgaaacctttgagctc
ataggttcagctggacctgagacatcaggggtgcgttgtatgaccttcaaccctgatggg
agaacccttctctgtggtttgcatgagagtttgaaggtatgctcttgggaaccaattaga
tgtcacgatacagtagatgttggatggtctcggctgtcggatcttaatattcatgaagag
aaactccttggctgctcttacaatcaaagttgtgttggagtgtgggttgtggatatttcg
cgtcttgaaccatatgcaatgggtaatactgctcgattaaatggtcaccctgatgtaaaa
tcgaattcgggtgggaatttatccaatctggcggatgatggtaccaaagccagttctggt
agactcttgatttctcaaaattgtgatcctgttaaagagaccaaatcttttggaagactt
tcagtatcacaaaacttggagcttcaaagagattctaggacccttactactactgcaaat
gcgcctggcactcctcaaagaataaatctgagtgttggtgcgaaagcacctccaattaac
accacagcatttcctaatacaactggtctgaagaggaattcagctaaagcccaatcagca
gcagctaattcttccattgtcaataggtcagaggtcatacccattattgttccaagaaat
aatgacagaatggagcaagtatctgaacccaggaaaggagtagttgcaacaagggcaatg
cagcagtcattgcagacaaaagtctctgattcacggaggttttcaactttcaaggaagac
cttgggagaccaaatgctgtgtcacagtttgacattgaagtccccaaggctattgaattc
agtagtacagcagacaagagcaatttcccttcagtaattgctggagctgcagcaactgag
aagaatgtgaaggatgacaagagtctggtctcagcaaaacttgaaacgcattcagcacct
gagttattttccggaaaccaaaatgaaaattatgaaacacgtggaaatgttattagtagg
agtgcttatcccatggaaggtcaaagaagagcaaggacacggtctgttgttgcaaattgg
gagaagagagacaggatcccatctcacgagggtcttgcttccaacactgttgttgggata
gtacctgctctgaatatgctttccaccaacttgagagggcatccttcatcagctgaaagt
gtaacagtttctgctacagatgaggataccatcactgacttgttggaacagcatgaccaa
tttgttggcttaatgcaatctcgtttggccaaattacaggttgtctatcagtgctggcaa
aggcatgacattaaaggggcacttagtgcaatggagaagatggcagatactgctgtgctt
gctgatgtaattagctttttaacagagaaaaatgatattattacattagagatttgcaca
tgccttctaccactccttgtgggaatgcttgagagcagcttggataggcatcaggatatt
tcactgaatatgctgctcaaacttgttaaagtatttggttcagtgatttattcttcattg
tctgcgccagcatcagttggtgttgatatcgaggcagagcaaaggatggatcgctacaat
ctttgctttcttgagcttgaaaaagtcaaacattggctgcccactcttacaagaagggga
gggtccattgccaagtccgcacaagagctgagtctagcacttcaagatgtttcgtga

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