Nicotiana tomentosiformis: 104093525
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Entry
104093525 CDS
T05025
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104093525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104093525
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104093525
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104093525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
104093525
NCBI-ProteinID:
XP_009597576
LinkDB
All DBs
Position
11:125033787..125041870
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AA seq
308 aa
AA seq
DB search
MAPGGSNYQDIGDSRSGYADYGIAPESSEFKSSPFRKSSAIIGGKHGAGSNSAVHELLEC
PVCMNPMYPPIHQCPNGHTLCHKCKKKVHVCPICRHELGNIRCLALEKIAESLELPCRYQ
IFGCQDIFTYQTRLLHEQNCRFRPYNCPYAGSECAVTGDIQYLVTHLKDDHKVDMHDGCT
FNHRYVKSNPQEVENATWMLTVFNCFGHQFCLHFEAFNLGLAPVYMAFLRFMGDDDDAKR
FSYSLEVGGFSRKLTWQGVPRSIRDSHKTVRDSLDGLIIQRSMALFFSGGDRKELKLKIA
GRIWREPL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggaggcagcaattaccaggatattggcgattcccgaagtggatatgctgat
tatggtattgcaccagaaagttctgaattcaaaagctccccttttagaaaatcttcagct
attattggtgggaagcatggagcgggatctaatagcgctgttcatgagctacttgaatgc
cctgtttgtatgaatccaatgtacccgcccattcaccagtgtccaaacggccacacatta
tgccataaatgcaagaaaaaagtacatgtatgcccaatttgccgccatgagcttggaaac
ataagatgtcttgcactggagaaaattgctgaatcgctggaattgccatgccgataccaa
atttttggctgtcaagatatattcacttatcagactaggcttctacatgagcagaactgc
agatttcgaccatacaattgcccgtatgcaggatctgaatgcgctgttactggtgatatt
cagtacctcgttacacacctaaaagatgatcacaaggttgacatgcatgatggatgtacc
ttcaaccatcgttatgtaaaatctaatcctcaagaagttgagaatgctacatggatgttg
acggttttcaactgtttcggtcaccagttttgcctgcacttcgaggctttcaaccttgga
ttggcaccagtgtacatggcattccttcgttttatgggtgacgatgatgatgcaaaaaga
tttagttatagtcttgaagtaggtggatttagcagaaagttaacatggcaaggagtaccg
aggagcatccgtgatagtcataaaactgttcgagacagtttagatggcctgattattcaa
aggagcatggcactcttcttctctggtggtgacaggaaggagctgaagctaaagatagct
ggccgcatttggagagaaccattataa
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