Nicotiana tomentosiformis: 104093598
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Entry
104093598 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104093598
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104093598
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104093598
NCBI-ProteinID:
XP_033511342
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Position
4:108521633..108528441
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AA seq
639 aa
AA seq
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MTAPGVQLHLPDDHHVVMDNGILQVTLSVPAGIVTRIKYNGVDNLLEILNDETNRGYWDV
VWSPAGTTGTTGTFERLICTTYKVILETDDQIELSFSREWDVSLQDKLIPLNIDKRFIML
KGSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDR
GQPLAYPEAVLLVNPVEPEFKGEVDDKYQYSCEDKDLKVHGWICMDPPLGFWIIIPSDEF
RSGGPLKQNLTSHVGPTALSMFLSAHYAGEDLVAKFGEGEPWKKVFGPVFIYLNYVNEGE
DPLILWEDAKEQMLVEVQSWPYSFPASEDFPSSSQRGNISGRLLVQDRYFKDDKISASGA
YVGLAPPGEVGSWQRECKDYQFWIKADEEGYYVISDIRAGNYNLYAFVPGFIGDYKSDIT
VTITSGCSIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYINKLFVNHPDKFR
QYGLWERYSDLYPNGDIVFTAGESDYKKDWFFAQVTRKRDEKTYIGTTWQIKFKLDSVKQ
KEIYTLRVALASAAQAELQVRVNDSSTNTPLFSSGVIGKDNAIARHGIHGLHWLFNVNLQ
GNILVEGENTIYLTQANATSPFQGIMYDYIRLEGPPSHD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcccggagtacagctgcacctccccgatgatcaccatgtggtgatggataat
ggtattctccaagtgacattatcagtaccagctggcattgtaaccagaatcaaatacaat
ggcgttgataatttgcttgagattctaaatgatgaaacaaacagaggatactgggacgtt
gtctggagtccagcaggaactacagggactacaggaacatttgaaaggctcatatgcaca
acctataaggtcatattggaaacagatgatcaaatagagctttccttctcaagggaatgg
gatgtgtcacttcaggacaagcttattcccctgaacatagacaaaaggtttataatgctt
aaaggttcttcaggtttctattcttatgcaatttatgaacatttagagggatggcctggt
ttcaaccttgatgagactaggattgcattcaagctcagaaaagacaagtttcattacatg
gcaatggcagataacaggcagagatacatgcccttacctgatgacaggttaccagataga
ggacaaccacttgcttatcctgaagcagtcctgcttgtcaatcccgtggagcctgagttc
aaaggcgaggtggatgacaagtatcagtactcatgtgaggataaagatctcaaggtccat
ggctggatttgtatggatccaccactagggttctggattatcattcccagtgacgaattt
cgatccgggggaccccttaaacaaaacctcacttctcatgttggtccaactgctctttct
atgtttctcagtgcccactatgcaggagaggatttggttgcaaagtttggagaaggagag
ccatggaaaaaagtctttggaccagtttttatatatcttaattatgtcaatgaaggggag
gatccccttattctctgggaggatgccaaagaacagatgctggtagaagttcaaagctgg
ccttacagttttccagcatctgaggattttccatcatcatcgcaacgcggtaatattagt
ggaagattgttagtccaagacaggtacttcaaagatgataagatatctgcttctggtgca
tatgttggcttagctccaccaggggaagtcggttcttggcaaagagaatgcaaggactat
caattctggataaaagcagatgaggaaggctattatgtaatcagtgatatacgagcaggc
aactataacttgtatgcatttgtccctggatttattggagattacaaaagtgatattaca
gttacaattacctcgggttgcagcattgagatggatgatcttgtctttgaacccccaaga
aatggacctacactttgggaaattggcattcctgatcgttctgctcgagagttttatatt
cctgatcctgatccaaaatatatcaacaaactctttgttaatcatcctgataagtttaga
cagtacgggctatgggagagatacagtgacttgtatccaaacggtgatatagtttttact
gctggagagagtgactacaaaaaagattggttctttgctcaagtcactaggaaaagggat
gagaagacatatataggaacaacatggcaaataaagttcaaacttgacagtgttaaacaa
aaggaaatctatacactaagagtggcacttgcatctgcagctcaagctgaattacaggtt
cgcgttaatgattcaagcacgaatactcctctattctcaagtggagtgatagggaaggat
aacgcgatagcaaggcatggaattcatggtctccattggctgttcaatgtgaatttgcag
ggtaatatacttgttgaaggggaaaataccatatatttgacccaagcaaatgcaactagt
ccttttcaagggatcatgtatgattatatccgtttagaaggacctccttcccatgactaa
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