KEGG   Nicotiana tomentosiformis: 104093898
Entry
104093898         CDS       T05025                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K11797  PH-interacting protein
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104093898
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104093898
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WDR55 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Bromodomain Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Auxin_resp Beta-prop_SPT8 VPS8_N Beta-prop_HPS5 SAT
Other DBs
NCBI-GeneID: 104093898
NCBI-ProteinID: XP_009598019
LinkDB
Position
1:92822733..92841634
AA seq 1665 aa
MDSGKCTSRNGATLSSMAPTSFLNRVYTKSQFEEESRFAEHTPMKDVNIDLREVYFLIMH
FLSSGPCRKTLGILRDELLEYELLPRRYHTWYSRKDVPSGDDDDNGVSFPLNYEDLVLRY
PHVEKDHLVKLLKQLLLSLGPPLQCGGGDAPGAADVPTLLGSGPFSLLACERNGVNKQAQ
SLPSYLRWPHMQANQVHGLSLREIGGGFPKHHRAPSIRLASYAIAKPSTMVQKMQTIKKL
RGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETGFCLASCRGHEGDITDLAVSSNNAL
VASASNDYSIRVWRLPDGLPISVLRGHTGAVTAIAFTPRPSSVYQLLSSSDDGTCRIWDA
RYSQCVPRVYSPRPKDNVSVKSSATAITNIQSSSNTSHNHQILCCAYNANGTVFVTGSSD
TLARVWSACKFSPDRPEELNHEIDTLSGHENDVNYVQFSGCAVASRSSTSDSFVEDCIPK
FRNSWFSHDNIVTCSRDGSAIIWTTKPRKSSHGKLGRSWGKAYHLKVPPPPMPPQPPRGG
PRQRFRPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAIDGSLVHSLTGHTQSTYVLDVH
PFNPRIAMSAGYDGKTILWDIWEGIPIRTYDIGRFKLVDGKFSQDGTSIVLSDDVGQIYL
LNTGQGESQKDAKYDQFFLGDYRPLIQDAQGNVLDQETQLAPYRRNMQDLLCDASMLPYP
EPYQSMYQRRRLGALGTEWRPPSVKFSVGTDANLSLGYHVLPVADLDIIAEPLPEFIDTL
FWEPDNDILNDETDSEYNMNEEVSTEGEHECVRDSSSSASVCSEEEKMRRSHKDSLRRSK
RKKSVSEVEVTSSGRRLRKKVKDDDVGTSSRSLRTRKSKNGRKATTKRKSTKLKSLRPQR
GAAHPAIVRYHSDSSSDEEDEGSSEDDSLETESPECWSSDQSIESDDKLPSKQQNYSTGG
SADVPPKSAEPQTNGENKRRLVLKLKIRDAKKLELSKDTATQCGDQADKSRSSQASEEII
EDNLVNLRLKEPGSYSADEIGMELSEKYNKTGIMVNDKEHKGVLGEHANFSASVDIQSLA
DNLMTEAQTNRGQLEASRSTAGNGPRDAACSSGGGKSSLFQLSSSPSHQPQQIGIGPGSN
KLTTTNDNPEVNPKPRVKTTIIKIKAKKVSRDSQAHCEFNRPTDAYCGDESTSKIFSHLE
QNQVPEVPETDNGPDRFGQKLHWGVLTDDTVDRSKSHGSRRRLLRSHDISGSTSDACIDH
DESGSEFPHAATDAARRKRSLRFTAMSRDTAFRKDDVKIRENHVAVGSSRNAEKLTKKAT
CFLPLGRTSANVSNRSSTDNKEHSSRAENVFSAGMSLNKAVKKMNWLLLSEHEEGYRYIP
QIGDEVVYFRQGHQEYIEYSDSSEPGPWTKNAAVFRAVEFCLVENLNYATLPGSGESCCK
VTLQFIDSTSPVFGQKFKIKLSELVNFPDFIIERSRYETAMERNWSYRDKCLVWWRDESD
QGGRWWEGRVVSVKAKSDQFPDSPWERCGILYKDESEPHPHSPWELHDIDSSWEQPHIDL
ESKNRVLSSITELLHSASRNQDFFGILKLKQVAGKLDFVNRFPVPLSPDIIQLRLENNYY
RSLEAMKHDFSVMLANGEAYFAKNRELSVKMKRLSDWFSETLSDL
NT seq 4998 nt   +upstreamnt  +downstreamnt
atggattcagggaagtgtacatctagaaatggcgctacattatcaagtatggcacctaca
agtttcctgaatagggtatacacaaaatctcaatttgaagaagaatcgagatttgctgaa
cataccccaatgaaggatgtaaatattgaccttagagaagtttattttctgattatgcat
tttttgtcatctgggccatgccgaaaaacgcttgggatactccgtgatgaacttttggaa
tatgagcttctacctaggagatatcatacttggtattcaagaaaagatgtacccagtgga
gatgacgatgacaatggtgtttctttccctctaaattatgaagatctggtgctaaggtat
cctcatgttgaaaaggatcacttagtaaagttgcttaaacaactgctgctgagtttgggt
cctccattgcaatgtggtgggggagatgccccgggtgctgctgatgtccccacgctactt
ggatctgggcctttttctcttttggcttgtgagagaaacggagtaaataagcaggctcaa
tcccttccttcatacctccgttggccacacatgcaggctaatcaggtgcatggtctaagt
ttgagagagattggaggtggtttcccaaaacatcaccgtgctccatctattcgtcttgca
agttatgctattgcaaagccgtcaactatggttcagaagatgcaaaccataaagaaacta
aggggacatagggatgctgtttattgtgcaatatttgaccgctcaggaagatatgtgatt
actggatctgatgatcgccttgtcaagatttggtcaatggaaactggattttgcctggct
agttgccgaggacatgaaggtgacatcactgatttggctgtcagttcaaacaatgcttta
gtggcgtctgcatcaaatgactacagcattcgagtttggcgtttgccagatgggttacct
atttcagttttgcgtggacacactggagctgtcactgctatcgcatttactccaaggcct
agctctgtgtatcagcttctatcgtcatcagatgacggaacttgtcgcatttgggatgct
aggtattcccagtgtgttccacgcgtttactcgccgaggccaaaggataacgtttctgtg
aagagcagtgctaccgcaataaccaacattcagtcctcaagtaatacatcacataaccat
caaattttgtgttgtgcatacaatgccaatggaactgtctttgtcactggcagctctgat
actttagcgagggtctggagtgcttgtaaattctccccagatcgccccgaggaactaaat
catgaaatagatacattatctggtcatgaaaatgatgtcaactatgtacagttcagtggc
tgtgcagttgcttcacgatcttcaacttctgattcatttgtggaggactgcattccaaaa
tttaggaactcttggtttagccatgacaacatagtcacttgttctcgggatggaagtgca
attatttggaccacaaaaccacgcaagtcatcccatggaaaacttggacgttcttggggt
aaggcatatcatcttaaagttcctcccccgccaatgccaccacagcctcctcgaggaggg
ccacgacagagatttcgccctactcctcgtggtgttaacatgatagtatggagcctggat
aatcgctttgtactggctgctataatggattgccgaatttgcgtttggaatgctattgat
ggtagcttggtgcactccttgactggtcacacacagtctacttatgttctggatgttcat
cctttcaaccccagaatcgcaatgagtgctggttatgatgggaaaaccatcctgtgggat
atatgggaggggatccccatccgcacatatgatataggacgctttaagttggttgatgga
aagttttcacaggatggaacatcaattgttctttctgatgatgttggacaaatatattta
ttaaatacaggccaaggcgagtctcaaaaggacgctaaatatgatcagttcttccttggg
gattaccgacccctcatccaggatgcgcaggggaacgttcttgatcaggagacacagcta
gctccatatcggaggaacatgcaagatcttctttgtgacgcaagtatgcttccatatcct
gaaccataccagagtatgtaccagcgacgccgcttgggagctctgggtactgagtggcgt
cctccttcagttaaattttctgtaggcacagacgctaatttgagcctagggtaccatgtt
ttgcccgtggctgacttggacataatagctgaacctctgccagagtttatcgataccctt
ttctgggagccagataatgatattcttaatgatgagactgattcagaatacaatatgaat
gaagaggtttctactgaaggagaacatgaatgtgtaagagacagctcttctagcgcttca
gtgtgtagtgaagaagagaagatgagacggagtcataaagatagcctgcgcagatcaaaa
aggaaaaaatctgtatcagaagtggaagtcacatcatctggaagacgtcttaggaagaaa
gttaaggatgacgatgttggcacttcatctagaagtcttagaactaggaaatcaaaaaat
gggcgaaaagctaccactaaaaggaagtcaactaaactaaagtcattaagacctcagcga
ggagctgcacatcctgctattgtccgttatcattctgacagctcttcagatgaagaagat
gaaggtagctctgaggatgattcattggaaactgagtcaccagaatgttggtcaagtgat
cagagcattgaatctgatgacaagctgccgagcaaacaacagaactattcaacaggtgga
tctgcggatgtacctcctaaatctgctgaacctcaaacaaacggtgagaacaaaaggaga
ttagtcctgaaattgaaaattcgtgatgctaagaagcttgagttatcaaaagacactgca
actcagtgtggtgaccaagctgataagtcacgttcttctcaagctagtgaagagataatt
gaagataatctggttaaccttagattaaaggagccaggatcatactctgcagatgaaatt
ggcatggaactgtctgagaaatacaataaaactggtattatggttaatgacaaggaacac
aaaggtgttctgggtgagcatgccaatttttctgccagtgtagatatccaaagtctggcc
gataatttaatgactgaggctcaaacaaatcggggacagcttgaagctagcagatcgact
gctggaaatggtccacgagatgcagcatgttcctcaggaggtggtaaaagttcattattt
cagttgtcatcgtcacctagtcatcagccacagcaaataggcatcggtccaggatcaaac
aagctgactaccaccaacgacaatcctgaagtaaacccaaaacctagagtgaagacaacc
ataataaagataaaagcaaagaaagtttccagggattctcaagctcattgtgaatttaat
cgtcctacagatgcttattgtggagatgaatcaacatctaaaatcttttcccatttggaa
caaaaccaagttccggaagtgccagaaacagacaatggccctgatagattcggtcagaaa
ttgcattggggtgtactgacggacgatactgttgacagaagcaagtctcatggatctaga
aggcgcttacttcgcagtcatgatattagtggaagtacttccgatgcttgtattgatcat
gatgaatcaggttctgaattccctcatgccgctactgatgcagcacgtagaaagagatcc
ttaagatttactgcaatgtcaagagatacagcattcaggaaagatgacgtaaagataaga
gagaaccatgtagctgtaggttcatcaagaaatgcagaaaagctgaccaagaaggctacg
tgttttctgccattaggaaggacttcagctaatgtgtccaaccggtcatctacagacaat
aaagagcattcttccagggcggaaaatgttttctcagctggaatgagcttgaataaggca
gtaaaaaaaatgaattggctgctattgtcagagcatgaagagggttaccgctacattcct
cagataggcgatgaagtagtatacttccgacaggggcatcaagaatatatagaatatagc
gattcatcggagcctggtccttggacaaagaatgcagctgtattccgagctgtggaattt
tgtttggttgagaatcttaattacgcaactcttcctggctctggtgagagttgctgtaaa
gttacacttcagttcatagatagcacttcccccgtctttggacagaagtttaagataaaa
ctgtctgaactagttaacttccctgacttcattattgagagatctcggtatgagactgca
atggagagaaattggtcatacagagacaaatgtcttgtttggtggagggatgagagtgat
caaggtggtaggtggtgggaaggtcgggtagtttctgtaaaagccaaatctgaccagttt
cctgacagtccatgggaaagatgcggtatcctatacaaagacgaatcagaaccccatcct
catagtccttgggaactacatgatatagatagttcatgggagcaacctcatattgacttg
gaaagcaaaaacagagttttgtcttctatcaccgagctactgcattcagcaagcagaaat
caggatttctttgggattctaaaattgaaacaagttgctgggaaactggattttgtgaat
aggttccctgttcctctatcacctgatataatccagttaaggttagagaacaactattat
agaagcttggaagcaatgaagcatgatttctctgtgatgctagcaaatggtgaggcttac
tttgccaaaaatagagagctttcagtgaaaatgaagcgtctttcagattggtttagtgag
acattgtcagatttgtga

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