Nicotiana tomentosiformis: 104094018
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Entry
104094018 CDS
T05025
Name
(RefSeq) zinc finger protein JACKDAW-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nto03000
]
104094018
Transcription factors [BR:
nto03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104094018
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
104094018
NCBI-ProteinID:
XP_009598165
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All DBs
Position
7:117085069..117087650
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AA seq
495 aa
AA seq
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MMSGDIFSIPSSVKGVVLPHHPQDVLLEPNPNPKSNSSSKKRRNLPGTPDPDAEVIALSP
KTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEIVKKKVYICPEKSCVH
NDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTL
FSRKDSFITHRAFCDALAEESARITSVGTCNNLNFNQQPNLAGGISQIGTGFAQDFSGMT
SGNSLHHQQQKPRLSLWLNQANNNSQLNNTLHMSAPSSNLFASSSSTGLPDHMVQMQSPN
NVFGNQMQWAIDKNSAATTPATSMTKTLCSMYSDNQNQHPKSSTPMSATALLQKASQIGS
TKSSPTFFTNTFGVMNSSSSSSNTPMFNTLSQNTSEMHQVFAKQSEEYNPTDNELLNGCP
NMSSLANTKAINLDQALMQTGGMQTQAVSFNFDNSLTRDFLGMGNEGGRPFLTPELAKFA
SMTSAMGLSHYSSGH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgatatcttttcaattccttcttctgtcaaaggagtagtactacctcat
catcctcaagatgtattacttgaaccaaaccctaaccctaaatccaattcttcttccaag
aaaagaagaaatcttccaggtacaccagatccagatgctgaagttattgcactttcacca
aaaacacttatggctacaaacagatttatatgtgaaatctgcaacaaaggttttcaaagg
gaccaaaacttgcaacttcataggagaggacacaatctaccatggaaattaaagcaaaga
aataaacaagaaatagtgaaaaaaaaagtatatatatgtccagaaaagagttgtgtacac
aatgatccttcacgtgcacttggagatcttactggtataaagaagcatttcagtaggaaa
catggtgagaaaaaatggaagtgtgaaaagtgttcaaagaaatatgcagttcagtctgat
tggaaagcacatactaagacttgtggcactagagagtataaatgtgactgtggaactctt
ttttccaggaaagatagtttcattacacatagagcattctgtgatgctttagctgaagag
agtgcaagaatcacttcagtgggaacttgtaacaatttgaacttcaaccagcaaccaaat
ttggctggtggaatttcccaaattgggacaggttttgcacaagattttagtggtatgaca
agtgggaattctctacatcatcagcaacaaaaaccaagattatcactttggttaaatcaa
gctaataataattcccagctcaataatactcttcacatgtcagcaccaagttcaaatctt
tttgcttcctctagttcaactggattaccagatcatatggtccaaatgcaatctcctaat
aatgtctttggtaatcaaatgcaatgggcaattgacaagaattctgcagcgactacccct
gccacttcaatgactaaaaccttatgttcaatgtattctgataatcaaaatcagcaccca
aaatcttcaacaccaatgtcagctacagcacttcttcaaaaagcttcccaaattggttct
accaaaagcagcccaactttctttacaaacacttttggtgtaatgaactcttcatcttct
tcctcaaacacaccaatgttcaacactttgtcccaaaacacaagtgaaatgcaccaagtt
tttgctaaacaatcagaggaatacaacccaacagataatgagctccttaatgggtgtcca
aatatgagttcattagctaatactaaagcaatcaatttggatcaggcattaatgcaaaca
ggtggtatgcaaactcaagctgtttcgttcaacttcgataacagtctaaccagagatttt
ttaggcatgggaaatgaagggggacggccatttttgacaccagaactggctaagtttgct
tcaatgacttcagctatggggttaagccattacagtagtggtcactag
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