Nicotiana tomentosiformis: 104094311
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Entry
104094311 CDS
T05025
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03420
Nucleotide excision repair
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104094311
09124 Replication and repair
03420 Nucleotide excision repair
104094311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nto03051
]
104094311
03400 DNA repair and recombination proteins [BR:
nto03400
]
104094311
Proteasome [BR:
nto03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104094311
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104094311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
TECR_N
UBA_3
UBA_RAD5A
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
104094311
NCBI-ProteinID:
XP_009598520
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Position
12:complement(121725004..121729951)
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AA seq
367 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIIAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLL
ENNVSEDGFLVVMLSKSKTAGSSGTSSAPQPSAPTVNPTPAPEVTPPAPEPKDVASASDA
ATASLPTDNFSQAASNLVAGDNLEQTIQQIMEMGGGNWDKETVTRALRAAYNNPERAIDY
LYSGIPETAEVAVPVASSGVNSAIGTTTVPAAPVSGAPNSAPLNLFPQENVAGAGGAALG
SLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRMIQEHHQEFLQLINEPVDG
SDGDIFDQPEQDMPHTVSVTPQEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLE
HAGDYED
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttactgtgaagactctgaaaggcagtcacttcgaaattagggttcagccctcc
gataccattatcgcagtcaagaaaaacattgaggatatacagggaaaagataattatcca
tgtggacagcagttactgattcacaatggtaaggttttgaaggatgaaagcacgttattg
gaaaataatgtttctgaagatggctttcttgttgtcatgcttagcaagagcaagactgct
ggttcaagtgggacgtcatctgcaccgcagccttcagctcctacagtcaacccaactcca
gcacctgaagtgactccaccagcaccggaacctaaggatgttgcatcagcttctgatgct
gcaacagctagtcttccaactgataattttagtcaagctgcatcaaatctagttgctgga
gataatcttgagcagacaatacaacaaattatggaaatgggtggtggcaactgggataaa
gaaacagtgacacgggcacttagagcagcttataacaatcctgaaagggctattgattac
ttgtattcagggattcctgaaacagcagaagttgctgtaccagtagctagtagcggggtt
aattctgcaatagggactactacagtgcctgctgcccctgtttctggagcacccaattca
gctcctttaaatttgtttccgcaggagaatgttgctggtgctggtggtgctgcccttgga
tcccttgattttctcaggaataaccaacagtttcaagcattacgttctatggttcaatct
aacccgcaaattctacagcctatgcttcaggaacttggaaagcaaaatcctcaacttttg
agaatgatacaagagcaccatcaagagtttcttcaactaatcaatgaacctgtagatggt
tctgatggggacatatttgatcagcctgagcaggacatgccccacacagttagtgtcact
ccacaagagcaggaggcgatcgagcgactcgaggctatgggttttgatcgagctcttgtt
attgaggcctttttagcttgtgatcgcaatgaggaactagctgcaaattatttattggag
catgcaggagattacgaagattga
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